get_biogrid_pin: Retrieve the Requested Release of Organism-specific BioGRID...
In pathfindR: Enrichment Analysis Utilizing Active Subnetworks
View source: R/data_generation.R
get_biogrid_pin R Documentation
Retrieve the Requested Release of Organism-specific BioGRID PIN
Description
Retrieve the Requested Release of Organism-specific BioGRID PIN
Usage
get_biogrid_pin(org = "Homo_sapiens", path2pin, release = "4.4.224")
Arguments
org
organism name. BioGRID naming requires underscores for spaces so
'Homo sapiens' becomes 'Homo_sapiens', 'Mus musculus' becomes 'Mus_musculus'
etc. See https://wiki.thebiogrid.org/doku.php/statistics for a full
list of available organisms (default = 'Homo_sapiens')
path2pin
the path of the file to save the PIN data. By default, the
PIN data is saved in a temporary file
release
the requested BioGRID release (default = '4.4.224')
Value
the path of the file in which the PIN data was saved. If
path2pin was not supplied by the user, the PIN data is saved in a
temporary file
pathfindR documentation built on Oct. 9, 2023, 1:07 a.m.
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View source: R/data_generation.R
| get_biogrid_pin | R Documentation |
Retrieve the Requested Release of Organism-specific BioGRID PIN
Description
Retrieve the Requested Release of Organism-specific BioGRID PIN
Usage
get_biogrid_pin(org = "Homo_sapiens", path2pin, release = "4.4.224")
Arguments
org |
organism name. BioGRID naming requires underscores for spaces so 'Homo sapiens' becomes 'Homo_sapiens', 'Mus musculus' becomes 'Mus_musculus' etc. See https://wiki.thebiogrid.org/doku.php/statistics for a full list of available organisms (default = 'Homo_sapiens') |
path2pin |
the path of the file to save the PIN data. By default, the PIN data is saved in a temporary file |
release |
the requested BioGRID release (default = '4.4.224') |
Value
the path of the file in which the PIN data was saved. If
path2pin was not supplied by the user, the PIN data is saved in a
temporary file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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