simDegradation: DNA Degradation Simulator
In pcrsim: Simulation of the Forensic DNA Process
Description
Usage
Arguments
Details
Value
See Also
Examples
Description
Simulates the degradation of DNA.
Usage
1
simDegradation(data, kit, deg, quant.target, debug = FALSE)
Arguments
data
data.frame with simulated data. Preferably output from simSample.
Required columns are 'Allele', 'DNA', and 'Sim'.
kit
character string for STR DNA amplification kit.
deg
numeric for the estimated degradation probability (chance per base pair)
quant.target
integer defining the quantification target size in base pair.
debug
logical TRUE to indicate debug mode.
Details
Simulates the DNA degradation process by calculating the
probability that a DNA fragment of the specific size (bp) is complete
i.e. not degraded. Then a binomial selection of non-degraded molecules
takes place with the previously calculated probability.
The number of molecules is taken from the required column 'DNA' which is
floored to avoid NAs in the rbinom function.
Value
data.frame with simulated results in columns 'Deg.Par', 'Deg.Prob', and 'Deg.DNA'.
See Also
Examples
1
2
3
4
5
6
7
8
9
10
11
# Simulate profile.
# Get allele frequency database.
require(strvalidator)
db <- strvalidator::getDb(getDb()[2])
# Simulate profile.
res <- simProfile(kit= "ESX17", db=db, sim=10, name="Test")
# Simulate sample.
res <- simSample(data=res, cells=5000)
# Simulate degradation.
res <- simDegradation(data=res, kit="ESX17", deg=0.03, quant.target=80)
print(res)
Example output
Loading required package: strvalidator
R session is headless; GTK+ not initialized.
STR-validator 2.0.0 loaded!
PCRsim 1.0.2 loaded!
SIMULATE PROFILE
SIMULATE SAMPLE
'Sample.Haploid' column added.
'Sample.Cells' column added.
'DNA' column added.
SIMULATE DEGRADATION
Audit trail created for data in function strvalidator::addSize.
Audit trail updated by function strvalidator::addSize.
'Size' column with estimated allele size added.
'Deg.Par' column added
'Deg.Prob' column added
'Deg.DNA' column added.
'DNA' column updated!
Sim Sample.Name Marker Allele Sample.Haploid Sample.Cells Size Deg.Par
1 1 Test1 AMEL X FALSE 5000 82 0.03
2 1 Test1 AMEL X FALSE 5000 82 0.03
3 1 Test1 D3S1358 16 FALSE 5000 126 0.03
4 1 Test1 D3S1358 18 FALSE 5000 134 0.03
5 1 Test1 vWA 16 FALSE 5000 149 0.03
6 1 Test1 vWA 17 FALSE 5000 153 0.03
7 1 Test1 D16S539 12 FALSE 5000 301 0.03
8 1 Test1 D16S539 8 FALSE 5000 285 0.03
9 1 Test1 D2S1338 19 FALSE 5000 228 0.03
10 1 Test1 D2S1338 17 FALSE 5000 220 0.03
11 1 Test1 D8S1179 15 FALSE 5000 236 0.03
12 1 Test1 D8S1179 16 FALSE 5000 240 0.03
13 1 Test1 D21S11 31.2 FALSE 5000 229 0.03
14 1 Test1 D21S11 30 FALSE 5000 223 0.03
15 1 Test1 D18S51 16 FALSE 5000 317 0.03
16 1 Test1 D18S51 15 FALSE 5000 313 0.03
17 1 Test1 D19S433 15 FALSE 5000 231 0.03
18 1 Test1 D19S433 12 FALSE 5000 219 0.03
19 1 Test1 TH01 8 FALSE 5000 169 0.03
20 1 Test1 TH01 9.3 FALSE 5000 176 0.03
21 1 Test1 FGA 27 FALSE 5000 316 0.03
22 1 Test1 FGA 24 FALSE 5000 304 0.03
23 1 Test1 D12S391 20 FALSE 5000 157 0.03
24 1 Test1 D12S391 19 FALSE 5000 153 0.03
25 1 Test1 D1S1656 11 FALSE 5000 139 0.03
26 1 Test1 D1S1656 16 FALSE 5000 159 0.03
27 1 Test1 D22S1045 15 FALSE 5000 102 0.03
28 1 Test1 D22S1045 16 FALSE 5000 105 0.03
29 1 Test1 D2S441 10 FALSE 5000 96 0.03
30 1 Test1 D2S441 11 FALSE 5000 100 0.03
31 1 Test1 D10S1248 16 FALSE 5000 109 0.03
32 1 Test1 D10S1248 13 FALSE 5000 97 0.03
33 1 Test1 SE33 29.2 FALSE 5000 371 0.03
34 1 Test1 SE33 29.2 FALSE 5000 371 0.03
35 2 Test2 AMEL X FALSE 5000 82 0.03
36 2 Test2 AMEL Y FALSE 5000 91 0.03
37 2 Test2 D3S1358 15 FALSE 5000 122 0.03
38 2 Test2 D3S1358 17 FALSE 5000 130 0.03
39 2 Test2 vWA 18 FALSE 5000 157 0.03
40 2 Test2 vWA 14 FALSE 5000 141 0.03
41 2 Test2 D16S539 10 FALSE 5000 293 0.03
42 2 Test2 D16S539 12 FALSE 5000 301 0.03
43 2 Test2 D2S1338 17 FALSE 5000 220 0.03
44 2 Test2 D2S1338 22 FALSE 5000 240 0.03
45 2 Test2 D8S1179 14 FALSE 5000 232 0.03
46 2 Test2 D8S1179 13 FALSE 5000 228 0.03
47 2 Test2 D21S11 29 FALSE 5000 219 0.03
48 2 Test2 D21S11 30.2 FALSE 5000 225 0.03
49 2 Test2 D18S51 15 FALSE 5000 313 0.03
50 2 Test2 D18S51 15 FALSE 5000 313 0.03
51 2 Test2 D19S433 12 FALSE 5000 219 0.03
52 2 Test2 D19S433 13 FALSE 5000 223 0.03
53 2 Test2 TH01 7 FALSE 5000 165 0.03
54 2 Test2 TH01 7 FALSE 5000 165 0.03
55 2 Test2 FGA 21 FALSE 5000 292 0.03
56 2 Test2 FGA 20 FALSE 5000 288 0.03
57 2 Test2 D12S391 20 FALSE 5000 157 0.03
58 2 Test2 D12S391 24 FALSE 5000 173 0.03
59 2 Test2 D1S1656 17.3 FALSE 5000 166 0.03
60 2 Test2 D1S1656 13 FALSE 5000 147 0.03
61 2 Test2 D22S1045 16 FALSE 5000 105 0.03
62 2 Test2 D22S1045 17 FALSE 5000 108 0.03
63 2 Test2 D2S441 12 FALSE 5000 104 0.03
64 2 Test2 D2S441 14 FALSE 5000 112 0.03
65 2 Test2 D10S1248 15 FALSE 5000 105 0.03
66 2 Test2 D10S1248 14 FALSE 5000 101 0.03
67 2 Test2 SE33 19 FALSE 5000 329 0.03
68 2 Test2 SE33 27.2 FALSE 5000 363 0.03
69 3 Test3 AMEL X FALSE 5000 82 0.03
70 3 Test3 AMEL X FALSE 5000 82 0.03
71 3 Test3 D3S1358 16 FALSE 5000 126 0.03
72 3 Test3 D3S1358 15 FALSE 5000 122 0.03
73 3 Test3 vWA 17 FALSE 5000 153 0.03
74 3 Test3 vWA 17 FALSE 5000 153 0.03
75 3 Test3 D16S539 12 FALSE 5000 301 0.03
76 3 Test3 D16S539 12 FALSE 5000 301 0.03
77 3 Test3 D2S1338 17 FALSE 5000 220 0.03
78 3 Test3 D2S1338 20 FALSE 5000 232 0.03
79 3 Test3 D8S1179 14 FALSE 5000 232 0.03
80 3 Test3 D8S1179 10 FALSE 5000 216 0.03
81 3 Test3 D21S11 28 FALSE 5000 215 0.03
82 3 Test3 D21S11 32.2 FALSE 5000 233 0.03
83 3 Test3 D18S51 15 FALSE 5000 313 0.03
84 3 Test3 D18S51 16 FALSE 5000 317 0.03
85 3 Test3 D19S433 14 FALSE 5000 227 0.03
86 3 Test3 D19S433 15 FALSE 5000 231 0.03
87 3 Test3 TH01 7 FALSE 5000 165 0.03
88 3 Test3 TH01 6 FALSE 5000 161 0.03
89 3 Test3 FGA 24 FALSE 5000 304 0.03
90 3 Test3 FGA 22 FALSE 5000 296 0.03
91 3 Test3 D12S391 22 FALSE 5000 165 0.03
92 3 Test3 D12S391 20 FALSE 5000 157 0.03
93 3 Test3 D1S1656 14 FALSE 5000 151 0.03
94 3 Test3 D1S1656 17 FALSE 5000 163 0.03
95 3 Test3 D22S1045 15 FALSE 5000 102 0.03
96 3 Test3 D22S1045 16 FALSE 5000 105 0.03
97 3 Test3 D2S441 11.3 FALSE 5000 103 0.03
98 3 Test3 D2S441 14 FALSE 5000 112 0.03
99 3 Test3 D10S1248 14 FALSE 5000 101 0.03
100 3 Test3 D10S1248 14 FALSE 5000 101 0.03
101 3 Test3 SE33 19 FALSE 5000 329 0.03
102 3 Test3 SE33 32.2 FALSE 5000 383 0.03
103 4 Test4 AMEL Y FALSE 5000 91 0.03
104 4 Test4 AMEL X FALSE 5000 82 0.03
105 4 Test4 D3S1358 16 FALSE 5000 126 0.03
106 4 Test4 D3S1358 15 FALSE 5000 122 0.03
107 4 Test4 vWA 16 FALSE 5000 149 0.03
108 4 Test4 vWA 16 FALSE 5000 149 0.03
109 4 Test4 D16S539 11 FALSE 5000 297 0.03
110 4 Test4 D16S539 14 FALSE 5000 309 0.03
111 4 Test4 D2S1338 24 FALSE 5000 248 0.03
112 4 Test4 D2S1338 23 FALSE 5000 244 0.03
113 4 Test4 D8S1179 14 FALSE 5000 232 0.03
114 4 Test4 D8S1179 12 FALSE 5000 224 0.03
115 4 Test4 D21S11 30 FALSE 5000 223 0.03
116 4 Test4 D21S11 30 FALSE 5000 223 0.03
117 4 Test4 D18S51 19 FALSE 5000 329 0.03
118 4 Test4 D18S51 15 FALSE 5000 313 0.03
119 4 Test4 D19S433 14 FALSE 5000 227 0.03
120 4 Test4 D19S433 12 FALSE 5000 219 0.03
121 4 Test4 TH01 6 FALSE 5000 161 0.03
122 4 Test4 TH01 9 FALSE 5000 173 0.03
123 4 Test4 FGA 27 FALSE 5000 316 0.03
124 4 Test4 FGA 23 FALSE 5000 300 0.03
125 4 Test4 D12S391 20 FALSE 5000 157 0.03
126 4 Test4 D12S391 17 FALSE 5000 145 0.03
127 4 Test4 D1S1656 11 FALSE 5000 139 0.03
128 4 Test4 D1S1656 14 FALSE 5000 151 0.03
129 4 Test4 D22S1045 11 FALSE 5000 90 0.03
130 4 Test4 D22S1045 16 FALSE 5000 105 0.03
131 4 Test4 D2S441 10 FALSE 5000 96 0.03
132 4 Test4 D2S441 12 FALSE 5000 104 0.03
133 4 Test4 D10S1248 15 FALSE 5000 105 0.03
134 4 Test4 D10S1248 14 FALSE 5000 101 0.03
135 4 Test4 SE33 16 FALSE 5000 317 0.03
136 4 Test4 SE33 19 FALSE 5000 329 0.03
137 5 Test5 AMEL Y FALSE 5000 91 0.03
138 5 Test5 AMEL X FALSE 5000 82 0.03
139 5 Test5 D3S1358 17 FALSE 5000 130 0.03
140 5 Test5 D3S1358 18 FALSE 5000 134 0.03
141 5 Test5 vWA 16 FALSE 5000 149 0.03
142 5 Test5 vWA 18 FALSE 5000 157 0.03
143 5 Test5 D16S539 12 FALSE 5000 301 0.03
144 5 Test5 D16S539 11 FALSE 5000 297 0.03
145 5 Test5 D2S1338 21 FALSE 5000 236 0.03
146 5 Test5 D2S1338 21 FALSE 5000 236 0.03
147 5 Test5 D8S1179 13 FALSE 5000 228 0.03
148 5 Test5 D8S1179 14 FALSE 5000 232 0.03
149 5 Test5 D21S11 32.2 FALSE 5000 233 0.03
150 5 Test5 D21S11 31.2 FALSE 5000 229 0.03
151 5 Test5 D18S51 19 FALSE 5000 329 0.03
152 5 Test5 D18S51 21 FALSE 5000 337 0.03
153 5 Test5 D19S433 14 FALSE 5000 227 0.03
154 5 Test5 D19S433 16.2 FALSE 5000 237 0.03
155 5 Test5 TH01 9 FALSE 5000 173 0.03
156 5 Test5 TH01 9.3 FALSE 5000 176 0.03
157 5 Test5 FGA 21 FALSE 5000 292 0.03
158 5 Test5 FGA 19 FALSE 5000 284 0.03
159 5 Test5 D12S391 22 FALSE 5000 165 0.03
160 5 Test5 D12S391 20 FALSE 5000 157 0.03
161 5 Test5 D1S1656 16.3 FALSE 5000 162 0.03
162 5 Test5 D1S1656 16 FALSE 5000 159 0.03
163 5 Test5 D22S1045 16 FALSE 5000 105 0.03
164 5 Test5 D22S1045 17 FALSE 5000 108 0.03
165 5 Test5 D2S441 14 FALSE 5000 112 0.03
166 5 Test5 D2S441 11 FALSE 5000 100 0.03
167 5 Test5 D10S1248 11 FALSE 5000 89 0.03
168 5 Test5 D10S1248 16 FALSE 5000 109 0.03
169 5 Test5 SE33 19 FALSE 5000 329 0.03
170 5 Test5 SE33 21.2 FALSE 5000 339 0.03
171 6 Test6 AMEL X FALSE 5000 82 0.03
172 6 Test6 AMEL Y FALSE 5000 91 0.03
173 6 Test6 D3S1358 19 FALSE 5000 138 0.03
174 6 Test6 D3S1358 17 FALSE 5000 130 0.03
175 6 Test6 vWA 16 FALSE 5000 149 0.03
176 6 Test6 vWA 14 FALSE 5000 141 0.03
177 6 Test6 D16S539 12 FALSE 5000 301 0.03
178 6 Test6 D16S539 11 FALSE 5000 297 0.03
179 6 Test6 D2S1338 22 FALSE 5000 240 0.03
180 6 Test6 D2S1338 23 FALSE 5000 244 0.03
181 6 Test6 D8S1179 14 FALSE 5000 232 0.03
182 6 Test6 D8S1179 15 FALSE 5000 236 0.03
183 6 Test6 D21S11 32.2 FALSE 5000 233 0.03
184 6 Test6 D21S11 29 FALSE 5000 219 0.03
185 6 Test6 D18S51 11 FALSE 5000 297 0.03
186 6 Test6 D18S51 16 FALSE 5000 317 0.03
187 6 Test6 D19S433 13 FALSE 5000 223 0.03
188 6 Test6 D19S433 14 FALSE 5000 227 0.03
189 6 Test6 TH01 9.3 FALSE 5000 176 0.03
190 6 Test6 TH01 7 FALSE 5000 165 0.03
191 6 Test6 FGA 22 FALSE 5000 296 0.03
192 6 Test6 FGA 22 FALSE 5000 296 0.03
193 6 Test6 D12S391 17 FALSE 5000 145 0.03
194 6 Test6 D12S391 21 FALSE 5000 161 0.03
195 6 Test6 D1S1656 16 FALSE 5000 159 0.03
196 6 Test6 D1S1656 11 FALSE 5000 139 0.03
197 6 Test6 D22S1045 16 FALSE 5000 105 0.03
198 6 Test6 D22S1045 15 FALSE 5000 102 0.03
199 6 Test6 D2S441 11 FALSE 5000 100 0.03
200 6 Test6 D2S441 11 FALSE 5000 100 0.03
201 6 Test6 D10S1248 13 FALSE 5000 97 0.03
202 6 Test6 D10S1248 17 FALSE 5000 113 0.03
203 6 Test6 SE33 25.2 FALSE 5000 355 0.03
204 6 Test6 SE33 19 FALSE 5000 329 0.03
205 7 Test7 AMEL Y FALSE 5000 91 0.03
206 7 Test7 AMEL X FALSE 5000 82 0.03
207 7 Test7 D3S1358 16 FALSE 5000 126 0.03
208 7 Test7 D3S1358 17 FALSE 5000 130 0.03
209 7 Test7 vWA 17 FALSE 5000 153 0.03
210 7 Test7 vWA 16 FALSE 5000 149 0.03
211 7 Test7 D16S539 9 FALSE 5000 289 0.03
212 7 Test7 D16S539 12 FALSE 5000 301 0.03
213 7 Test7 D2S1338 22 FALSE 5000 240 0.03
214 7 Test7 D2S1338 21 FALSE 5000 236 0.03
215 7 Test7 D8S1179 15 FALSE 5000 236 0.03
216 7 Test7 D8S1179 13 FALSE 5000 228 0.03
217 7 Test7 D21S11 31.2 FALSE 5000 229 0.03
218 7 Test7 D21S11 29 FALSE 5000 219 0.03
219 7 Test7 D18S51 12 FALSE 5000 301 0.03
220 7 Test7 D18S51 19 FALSE 5000 329 0.03
221 7 Test7 D19S433 16.2 FALSE 5000 237 0.03
222 7 Test7 D19S433 12 FALSE 5000 219 0.03
223 7 Test7 TH01 9 FALSE 5000 173 0.03
224 7 Test7 TH01 9.3 FALSE 5000 176 0.03
225 7 Test7 FGA 21 FALSE 5000 292 0.03
226 7 Test7 FGA 23 FALSE 5000 300 0.03
227 7 Test7 D12S391 21 FALSE 5000 161 0.03
228 7 Test7 D12S391 21 FALSE 5000 161 0.03
229 7 Test7 D1S1656 13 FALSE 5000 147 0.03
230 7 Test7 D1S1656 15 FALSE 5000 155 0.03
231 7 Test7 D22S1045 16 FALSE 5000 105 0.03
232 7 Test7 D22S1045 15 FALSE 5000 102 0.03
233 7 Test7 D2S441 14 FALSE 5000 112 0.03
234 7 Test7 D2S441 14 FALSE 5000 112 0.03
235 7 Test7 D10S1248 13 FALSE 5000 97 0.03
236 7 Test7 D10S1248 15 FALSE 5000 105 0.03
237 7 Test7 SE33 27.2 FALSE 5000 363 0.03
238 7 Test7 SE33 15 FALSE 5000 313 0.03
239 8 Test8 AMEL Y FALSE 5000 91 0.03
240 8 Test8 AMEL X FALSE 5000 82 0.03
241 8 Test8 D3S1358 16 FALSE 5000 126 0.03
242 8 Test8 D3S1358 15 FALSE 5000 122 0.03
243 8 Test8 vWA 17 FALSE 5000 153 0.03
244 8 Test8 vWA 15 FALSE 5000 145 0.03
245 8 Test8 D16S539 11 FALSE 5000 297 0.03
246 8 Test8 D16S539 12 FALSE 5000 301 0.03
247 8 Test8 D2S1338 26 FALSE 5000 256 0.03
248 8 Test8 D2S1338 17 FALSE 5000 220 0.03
249 8 Test8 D8S1179 14 FALSE 5000 232 0.03
250 8 Test8 D8S1179 16 FALSE 5000 240 0.03
251 8 Test8 D21S11 30 FALSE 5000 223 0.03
252 8 Test8 D21S11 32.2 FALSE 5000 233 0.03
253 8 Test8 D18S51 13 FALSE 5000 305 0.03
254 8 Test8 D18S51 20 FALSE 5000 333 0.03
255 8 Test8 D19S433 13 FALSE 5000 223 0.03
256 8 Test8 D19S433 15.2 FALSE 5000 233 0.03
257 8 Test8 TH01 9 FALSE 5000 173 0.03
258 8 Test8 TH01 6 FALSE 5000 161 0.03
259 8 Test8 FGA 25 FALSE 5000 308 0.03
260 8 Test8 FGA 21 FALSE 5000 292 0.03
261 8 Test8 D12S391 18 FALSE 5000 149 0.03
262 8 Test8 D12S391 20 FALSE 5000 157 0.03
263 8 Test8 D1S1656 17.3 FALSE 5000 166 0.03
264 8 Test8 D1S1656 14 FALSE 5000 151 0.03
265 8 Test8 D22S1045 16 FALSE 5000 105 0.03
266 8 Test8 D22S1045 15 FALSE 5000 102 0.03
267 8 Test8 D2S441 11 FALSE 5000 100 0.03
268 8 Test8 D2S441 11 FALSE 5000 100 0.03
269 8 Test8 D10S1248 14 FALSE 5000 101 0.03
270 8 Test8 D10S1248 13 FALSE 5000 97 0.03
271 8 Test8 SE33 22 FALSE 5000 341 0.03
272 8 Test8 SE33 32.2 FALSE 5000 383 0.03
273 9 Test9 AMEL X FALSE 5000 82 0.03
274 9 Test9 AMEL X FALSE 5000 82 0.03
275 9 Test9 D3S1358 16 FALSE 5000 126 0.03
276 9 Test9 D3S1358 15 FALSE 5000 122 0.03
277 9 Test9 vWA 18 FALSE 5000 157 0.03
278 9 Test9 vWA 18 FALSE 5000 157 0.03
279 9 Test9 D16S539 8 FALSE 5000 285 0.03
280 9 Test9 D16S539 11 FALSE 5000 297 0.03
281 9 Test9 D2S1338 17 FALSE 5000 220 0.03
282 9 Test9 D2S1338 25 FALSE 5000 252 0.03
283 9 Test9 D8S1179 12 FALSE 5000 224 0.03
284 9 Test9 D8S1179 12 FALSE 5000 224 0.03
285 9 Test9 D21S11 32.2 FALSE 5000 233 0.03
286 9 Test9 D21S11 29 FALSE 5000 219 0.03
287 9 Test9 D18S51 17 FALSE 5000 321 0.03
288 9 Test9 D18S51 14 FALSE 5000 309 0.03
289 9 Test9 D19S433 14 FALSE 5000 227 0.03
290 9 Test9 D19S433 13 FALSE 5000 223 0.03
291 9 Test9 TH01 7 FALSE 5000 165 0.03
292 9 Test9 TH01 6 FALSE 5000 161 0.03
293 9 Test9 FGA 22 FALSE 5000 296 0.03
294 9 Test9 FGA 25 FALSE 5000 308 0.03
295 9 Test9 D12S391 17 FALSE 5000 145 0.03
296 9 Test9 D12S391 21 FALSE 5000 161 0.03
297 9 Test9 D1S1656 14 FALSE 5000 151 0.03
298 9 Test9 D1S1656 14 FALSE 5000 151 0.03
299 9 Test9 D22S1045 11 FALSE 5000 90 0.03
300 9 Test9 D22S1045 16 FALSE 5000 105 0.03
301 9 Test9 D2S441 14 FALSE 5000 112 0.03
302 9 Test9 D2S441 14 FALSE 5000 112 0.03
303 9 Test9 D10S1248 13 FALSE 5000 97 0.03
304 9 Test9 D10S1248 14 FALSE 5000 101 0.03
305 9 Test9 SE33 22.2 FALSE 5000 343 0.03
306 9 Test9 SE33 12.2 FALSE 5000 303 0.03
307 10 Test10 AMEL Y FALSE 5000 91 0.03
308 10 Test10 AMEL X FALSE 5000 82 0.03
309 10 Test10 D3S1358 14 FALSE 5000 118 0.03
310 10 Test10 D3S1358 14 FALSE 5000 118 0.03
311 10 Test10 vWA 18 FALSE 5000 157 0.03
312 10 Test10 vWA 14 FALSE 5000 141 0.03
313 10 Test10 D16S539 11 FALSE 5000 297 0.03
314 10 Test10 D16S539 11 FALSE 5000 297 0.03
315 10 Test10 D2S1338 24 FALSE 5000 248 0.03
316 10 Test10 D2S1338 21 FALSE 5000 236 0.03
317 10 Test10 D8S1179 9 FALSE 5000 212 0.03
318 10 Test10 D8S1179 14 FALSE 5000 232 0.03
319 10 Test10 D21S11 33 FALSE 5000 235 0.03
320 10 Test10 D21S11 29 FALSE 5000 219 0.03
321 10 Test10 D18S51 22 FALSE 5000 341 0.03
322 10 Test10 D18S51 20 FALSE 5000 333 0.03
323 10 Test10 D19S433 14 FALSE 5000 227 0.03
324 10 Test10 D19S433 14 FALSE 5000 227 0.03
325 10 Test10 TH01 7 FALSE 5000 165 0.03
326 10 Test10 TH01 6 FALSE 5000 161 0.03
327 10 Test10 FGA 23 FALSE 5000 300 0.03
328 10 Test10 FGA 22 FALSE 5000 296 0.03
329 10 Test10 D12S391 16 FALSE 5000 141 0.03
330 10 Test10 D12S391 20 FALSE 5000 157 0.03
331 10 Test10 D1S1656 15 FALSE 5000 155 0.03
332 10 Test10 D1S1656 17 FALSE 5000 163 0.03
333 10 Test10 D22S1045 17 FALSE 5000 108 0.03
334 10 Test10 D22S1045 17 FALSE 5000 108 0.03
335 10 Test10 D2S441 14 FALSE 5000 112 0.03
336 10 Test10 D2S441 12 FALSE 5000 104 0.03
337 10 Test10 D10S1248 14 FALSE 5000 101 0.03
338 10 Test10 D10S1248 15 FALSE 5000 105 0.03
339 10 Test10 SE33 19 FALSE 5000 329 0.03
340 10 Test10 SE33 14 FALSE 5000 309 0.03
Deg.Prob Deg.DNA DNA
1 9.409000e-01 4675 4675
2 9.409000e-01 4704 4704
3 2.463201e-01 1205 1205
4 1.930517e-01 952 952
5 1.222502e-01 581 581
6 1.082272e-01 545 545
7 1.192761e-03 6 6
8 1.941805e-03 10 10
9 1.102089e-02 54 54
10 1.406186e-02 72 72
11 8.637549e-03 42 42
12 7.646760e-03 42 42
13 1.069026e-02 47 47
14 1.283388e-02 62 62
15 7.326575e-04 3 3
16 8.275878e-04 5 5
17 1.005847e-02 50 50
18 1.449676e-02 82 82
19 6.647898e-02 342 342
20 5.371388e-02 283 283
21 7.553170e-04 7 7
22 1.088600e-03 7 7
23 9.581280e-02 461 461
24 1.082272e-01 547 547
25 1.657801e-01 830 830
26 9.015026e-02 420 420
27 5.116561e-01 2593 2593
28 4.669747e-01 2288 2288
29 6.142537e-01 3024 3024
30 5.437943e-01 2695 2695
31 4.134093e-01 2101 2101
32 5.958260e-01 3036 3036
33 1.414408e-04 0 0
34 1.414408e-04 0 0
35 9.409000e-01 4699 4699
36 7.153014e-01 3560 3560
37 2.782357e-01 1377 1377
38 2.180654e-01 1055 1055
39 9.581280e-02 477 477
40 1.559825e-01 811 811
41 1.521876e-03 6 6
42 1.192761e-03 8 8
43 1.406186e-02 71 71
44 7.646760e-03 44 44
45 9.756715e-03 27 27
46 1.102089e-02 56 56
47 1.449676e-02 68 68
48 1.207540e-02 41 41
49 8.275878e-04 7 7
50 8.275878e-04 1 1
51 1.449676e-02 64 64
52 1.283388e-02 69 69
53 7.509265e-02 353 353
54 7.509265e-02 379 379
55 1.568945e-03 10 10
56 1.772233e-03 10 10
57 9.581280e-02 468 468
58 5.885336e-02 302 302
59 7.283987e-02 349 349
60 1.299290e-01 645 645
61 4.669747e-01 2392 2392
62 4.261952e-01 2136 2136
63 4.814172e-01 2405 2405
64 3.773076e-01 1871 1871
65 4.669747e-01 2357 2357
66 5.274805e-01 2608 2608
67 5.083488e-04 4 4
68 1.804682e-04 0 0
69 9.409000e-01 4697 4697
70 9.409000e-01 4693 4693
71 2.463201e-01 1247 1247
72 2.782357e-01 1378 1378
73 1.082272e-01 525 525
74 1.082272e-01 530 530
75 1.192761e-03 6 6
76 1.192761e-03 6 6
77 1.406186e-02 80 80
78 9.756715e-03 59 59
79 9.756715e-03 51 51
80 1.588385e-02 69 69
81 1.637511e-02 76 76
82 9.464013e-03 64 64
83 8.275878e-04 6 6
84 7.326575e-04 2 2
85 1.136174e-02 71 71
86 1.005847e-02 46 46
87 7.509265e-02 363 363
88 8.482238e-02 448 448
89 1.088600e-03 5 5
90 1.388976e-03 12 12
91 7.509265e-02 359 359
92 9.581280e-02 496 496
93 1.150252e-01 601 601
94 7.980938e-02 386 386
95 5.116561e-01 2515 2515
96 4.669747e-01 2345 2345
97 4.963064e-01 2517 2517
98 3.773076e-01 1853 1853
99 5.274805e-01 2618 2618
100 5.274805e-01 2591 2591
101 5.083488e-04 3 3
102 9.813761e-05 0 0
103 7.153014e-01 3574 3574
104 9.409000e-01 4703 4703
105 2.463201e-01 1167 1167
106 2.782357e-01 1374 1374
107 1.222502e-01 628 628
108 1.222502e-01 600 600
109 1.347306e-03 3 3
110 9.348182e-04 5 5
111 5.993098e-03 39 39
112 6.769622e-03 30 30
113 9.756715e-03 55 55
114 1.244886e-02 57 57
115 1.283388e-02 59 59
116 1.283388e-02 64 64
117 5.083488e-04 3 3
118 8.275878e-04 7 7
119 1.136174e-02 57 57
120 1.449676e-02 69 69
121 8.482238e-02 423 423
122 5.885336e-02 286 286
123 7.553170e-04 6 6
124 1.229650e-03 1 1
125 9.581280e-02 478 478
126 1.380902e-01 651 651
127 1.657801e-01 825 825
128 1.150252e-01 542 542
129 7.374241e-01 3626 3626
130 4.669747e-01 2352 2352
131 6.142537e-01 3044 3044
132 4.814172e-01 2429 2429
133 4.669747e-01 2356 2356
134 5.274805e-01 2607 2607
135 7.326575e-04 0 0
136 5.083488e-04 2 2
137 7.153014e-01 3534 3534
138 9.409000e-01 4712 4712
139 2.180654e-01 1076 1076
140 1.930517e-01 994 994
141 1.222502e-01 599 599
142 9.581280e-02 495 495
143 1.192761e-03 4 4
144 1.347306e-03 1 1
145 8.637549e-03 39 39
146 8.637549e-03 49 49
147 1.102089e-02 48 48
148 9.756715e-03 55 55
149 9.464013e-03 53 53
150 1.069026e-02 54 54
151 5.083488e-04 2 2
152 3.984150e-04 1 1
153 1.136174e-02 56 56
154 8.378423e-03 40 40
155 5.885336e-02 271 271
156 5.371388e-02 284 284
157 1.568945e-03 6 6
158 2.001860e-03 7 7
159 7.509265e-02 397 397
160 9.581280e-02 478 478
161 8.227771e-02 424 424
162 9.015026e-02 460 460
163 4.669747e-01 2327 2327
164 4.261952e-01 2162 2162
165 3.773076e-01 1859 1859
166 5.437943e-01 2764 2764
167 7.602311e-01 3767 3767
168 4.134093e-01 2130 2130
169 5.083488e-04 3 3
170 3.748687e-04 1 1
171 9.409000e-01 4668 4668
172 7.153014e-01 3601 3601
173 1.709073e-01 814 814
174 2.180654e-01 1090 1090
175 1.222502e-01 641 641
176 1.559825e-01 782 782
177 1.192761e-03 6 6
178 1.347306e-03 13 13
179 7.646760e-03 34 34
180 6.769622e-03 30 30
181 9.756715e-03 60 60
182 8.637549e-03 35 35
183 9.464013e-03 44 44
184 1.449676e-02 62 62
185 1.347306e-03 6 6
186 7.326575e-04 5 5
187 1.283388e-02 54 54
188 1.136174e-02 69 69
189 5.371388e-02 297 297
190 7.509265e-02 390 390
191 1.388976e-03 4 4
192 1.388976e-03 9 9
193 1.380902e-01 724 724
194 8.482238e-02 425 425
195 9.015026e-02 404 404
196 1.657801e-01 811 811
197 4.669747e-01 2316 2316
198 5.116561e-01 2497 2497
199 5.437943e-01 2766 2766
200 5.437943e-01 2806 2806
201 5.958260e-01 3003 3003
202 3.659883e-01 1771 1771
203 2.302645e-04 2 2
204 5.083488e-04 0 0
205 7.153014e-01 3565 3565
206 9.409000e-01 4711 4711
207 2.463201e-01 1174 1174
208 2.180654e-01 1088 1088
209 1.082272e-01 515 515
210 1.222502e-01 580 580
211 1.719066e-03 7 7
212 1.192761e-03 2 2
213 7.646760e-03 36 36
214 8.637549e-03 43 43
215 8.637549e-03 42 42
216 1.102089e-02 49 49
217 1.069026e-02 61 61
218 1.449676e-02 65 65
219 1.192761e-03 8 8
220 5.083488e-04 1 1
221 8.378423e-03 57 57
222 1.449676e-02 61 61
223 5.885336e-02 303 303
224 5.371388e-02 257 257
225 1.568945e-03 11 11
226 1.229650e-03 9 9
227 8.482238e-02 430 430
228 8.482238e-02 434 434
229 1.299290e-01 617 617
230 1.018310e-01 536 536
231 4.669747e-01 2399 2399
232 5.116561e-01 2575 2575
233 3.773076e-01 1894 1894
234 3.773076e-01 1968 1968
235 5.958260e-01 2966 2966
236 4.669747e-01 2287 2287
237 1.804682e-04 1 1
238 8.275878e-04 1 1
239 7.153014e-01 3657 3657
240 9.409000e-01 4709 4709
241 2.463201e-01 1219 1219
242 2.782357e-01 1448 1448
243 1.082272e-01 497 497
244 1.380902e-01 675 675
245 1.347306e-03 3 3
246 1.192761e-03 1 1
247 4.697051e-03 26 26
248 1.406186e-02 63 63
249 9.756715e-03 45 45
250 7.646760e-03 40 40
251 1.283388e-02 52 52
252 9.464013e-03 45 45
253 1.055942e-03 4 4
254 4.500376e-04 0 0
255 1.283388e-02 68 68
256 9.464013e-03 46 46
257 5.885336e-02 270 270
258 8.482238e-02 455 455
259 9.637301e-04 5 5
260 1.568945e-03 11 11
261 1.222502e-01 601 601
262 9.581280e-02 495 495
263 7.283987e-02 367 367
264 1.150252e-01 585 585
265 4.669747e-01 2356 2356
266 5.116561e-01 2557 2557
267 5.437943e-01 2637 2637
268 5.437943e-01 2755 2755
269 5.274805e-01 2663 2663
270 5.958260e-01 3016 3016
271 3.527140e-04 2 2
272 9.813761e-05 0 0
273 9.409000e-01 4675 4675
274 9.409000e-01 4703 4703
275 2.463201e-01 1229 1229
276 2.782357e-01 1392 1392
277 9.581280e-02 435 435
278 9.581280e-02 472 472
279 1.941805e-03 13 13
280 1.347306e-03 9 9
281 1.406186e-02 59 59
282 5.305646e-03 28 28
283 1.244886e-02 67 67
284 1.244886e-02 75 75
285 9.464013e-03 54 54
286 1.449676e-02 66 66
287 6.486164e-04 5 5
288 9.348182e-04 3 3
289 1.136174e-02 58 58
290 1.283388e-02 50 50
291 7.509265e-02 362 362
292 8.482238e-02 404 404
293 1.388976e-03 12 12
294 9.637301e-04 2 2
295 1.380902e-01 695 695
296 8.482238e-02 449 449
297 1.150252e-01 599 599
298 1.150252e-01 525 525
299 7.374241e-01 3684 3684
300 4.669747e-01 2349 2349
301 3.773076e-01 1939 1939
302 3.773076e-01 1883 1883
303 5.958260e-01 3015 3015
304 5.274805e-01 2678 2678
305 3.318686e-04 3 3
306 1.122268e-03 5 5
307 7.153014e-01 3564 3564
308 9.409000e-01 4701 4701
309 3.142866e-01 1570 1570
310 3.142866e-01 1582 1582
311 9.581280e-02 529 529
312 1.559825e-01 800 800
313 1.347306e-03 5 5
314 1.347306e-03 11 11
315 5.993098e-03 34 34
316 8.637549e-03 41 41
317 1.794192e-02 103 103
318 9.756715e-03 51 51
319 8.904690e-03 52 52
320 1.449676e-02 75 75
321 3.527140e-04 3 3
322 4.500376e-04 5 5
323 1.136174e-02 55 55
324 1.136174e-02 59 59
325 7.509265e-02 415 415
326 8.482238e-02 423 423
327 1.229650e-03 3 3
328 1.388976e-03 3 3
329 1.559825e-01 803 803
330 9.581280e-02 451 451
331 1.018310e-01 521 521
332 7.980938e-02 390 390
333 4.261952e-01 2203 2203
334 4.261952e-01 2143 2143
335 3.773076e-01 1827 1827
336 4.814172e-01 2390 2390
337 5.274805e-01 2592 2592
338 4.669747e-01 2365 2365
339 5.083488e-04 0 0
340 9.348182e-04 7 7
pcrsim documentation built on May 2, 2019, 2:40 a.m.
R Package Documentation
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Description Usage Arguments Details Value See Also Examples
Description
Simulates the degradation of DNA.
Usage
1 | simDegradation(data, kit, deg, quant.target, debug = FALSE)
|
Arguments
data |
data.frame with simulated data. Preferably output from |
kit |
character string for STR DNA amplification kit. |
deg |
numeric for the estimated degradation probability (chance per base pair) |
quant.target |
integer defining the quantification target size in base pair. |
debug |
logical TRUE to indicate debug mode. |
Details
Simulates the DNA degradation process by calculating the
probability that a DNA fragment of the specific size (bp) is complete
i.e. not degraded. Then a binomial selection of non-degraded molecules
takes place with the previously calculated probability.
The number of molecules is taken from the required column 'DNA' which is
floored to avoid NAs in the rbinom function.
Value
data.frame with simulated results in columns 'Deg.Par', 'Deg.Prob', and 'Deg.DNA'.
See Also
Examples
1 2 3 4 5 6 7 8 9 10 11 | # Simulate profile.
# Get allele frequency database.
require(strvalidator)
db <- strvalidator::getDb(getDb()[2])
# Simulate profile.
res <- simProfile(kit= "ESX17", db=db, sim=10, name="Test")
# Simulate sample.
res <- simSample(data=res, cells=5000)
# Simulate degradation.
res <- simDegradation(data=res, kit="ESX17", deg=0.03, quant.target=80)
print(res)
|
Example output
Loading required package: strvalidator
R session is headless; GTK+ not initialized.
STR-validator 2.0.0 loaded!
PCRsim 1.0.2 loaded!
SIMULATE PROFILE
SIMULATE SAMPLE
'Sample.Haploid' column added.
'Sample.Cells' column added.
'DNA' column added.
SIMULATE DEGRADATION
Audit trail created for data in function strvalidator::addSize.
Audit trail updated by function strvalidator::addSize.
'Size' column with estimated allele size added.
'Deg.Par' column added
'Deg.Prob' column added
'Deg.DNA' column added.
'DNA' column updated!
Sim Sample.Name Marker Allele Sample.Haploid Sample.Cells Size Deg.Par
1 1 Test1 AMEL X FALSE 5000 82 0.03
2 1 Test1 AMEL X FALSE 5000 82 0.03
3 1 Test1 D3S1358 16 FALSE 5000 126 0.03
4 1 Test1 D3S1358 18 FALSE 5000 134 0.03
5 1 Test1 vWA 16 FALSE 5000 149 0.03
6 1 Test1 vWA 17 FALSE 5000 153 0.03
7 1 Test1 D16S539 12 FALSE 5000 301 0.03
8 1 Test1 D16S539 8 FALSE 5000 285 0.03
9 1 Test1 D2S1338 19 FALSE 5000 228 0.03
10 1 Test1 D2S1338 17 FALSE 5000 220 0.03
11 1 Test1 D8S1179 15 FALSE 5000 236 0.03
12 1 Test1 D8S1179 16 FALSE 5000 240 0.03
13 1 Test1 D21S11 31.2 FALSE 5000 229 0.03
14 1 Test1 D21S11 30 FALSE 5000 223 0.03
15 1 Test1 D18S51 16 FALSE 5000 317 0.03
16 1 Test1 D18S51 15 FALSE 5000 313 0.03
17 1 Test1 D19S433 15 FALSE 5000 231 0.03
18 1 Test1 D19S433 12 FALSE 5000 219 0.03
19 1 Test1 TH01 8 FALSE 5000 169 0.03
20 1 Test1 TH01 9.3 FALSE 5000 176 0.03
21 1 Test1 FGA 27 FALSE 5000 316 0.03
22 1 Test1 FGA 24 FALSE 5000 304 0.03
23 1 Test1 D12S391 20 FALSE 5000 157 0.03
24 1 Test1 D12S391 19 FALSE 5000 153 0.03
25 1 Test1 D1S1656 11 FALSE 5000 139 0.03
26 1 Test1 D1S1656 16 FALSE 5000 159 0.03
27 1 Test1 D22S1045 15 FALSE 5000 102 0.03
28 1 Test1 D22S1045 16 FALSE 5000 105 0.03
29 1 Test1 D2S441 10 FALSE 5000 96 0.03
30 1 Test1 D2S441 11 FALSE 5000 100 0.03
31 1 Test1 D10S1248 16 FALSE 5000 109 0.03
32 1 Test1 D10S1248 13 FALSE 5000 97 0.03
33 1 Test1 SE33 29.2 FALSE 5000 371 0.03
34 1 Test1 SE33 29.2 FALSE 5000 371 0.03
35 2 Test2 AMEL X FALSE 5000 82 0.03
36 2 Test2 AMEL Y FALSE 5000 91 0.03
37 2 Test2 D3S1358 15 FALSE 5000 122 0.03
38 2 Test2 D3S1358 17 FALSE 5000 130 0.03
39 2 Test2 vWA 18 FALSE 5000 157 0.03
40 2 Test2 vWA 14 FALSE 5000 141 0.03
41 2 Test2 D16S539 10 FALSE 5000 293 0.03
42 2 Test2 D16S539 12 FALSE 5000 301 0.03
43 2 Test2 D2S1338 17 FALSE 5000 220 0.03
44 2 Test2 D2S1338 22 FALSE 5000 240 0.03
45 2 Test2 D8S1179 14 FALSE 5000 232 0.03
46 2 Test2 D8S1179 13 FALSE 5000 228 0.03
47 2 Test2 D21S11 29 FALSE 5000 219 0.03
48 2 Test2 D21S11 30.2 FALSE 5000 225 0.03
49 2 Test2 D18S51 15 FALSE 5000 313 0.03
50 2 Test2 D18S51 15 FALSE 5000 313 0.03
51 2 Test2 D19S433 12 FALSE 5000 219 0.03
52 2 Test2 D19S433 13 FALSE 5000 223 0.03
53 2 Test2 TH01 7 FALSE 5000 165 0.03
54 2 Test2 TH01 7 FALSE 5000 165 0.03
55 2 Test2 FGA 21 FALSE 5000 292 0.03
56 2 Test2 FGA 20 FALSE 5000 288 0.03
57 2 Test2 D12S391 20 FALSE 5000 157 0.03
58 2 Test2 D12S391 24 FALSE 5000 173 0.03
59 2 Test2 D1S1656 17.3 FALSE 5000 166 0.03
60 2 Test2 D1S1656 13 FALSE 5000 147 0.03
61 2 Test2 D22S1045 16 FALSE 5000 105 0.03
62 2 Test2 D22S1045 17 FALSE 5000 108 0.03
63 2 Test2 D2S441 12 FALSE 5000 104 0.03
64 2 Test2 D2S441 14 FALSE 5000 112 0.03
65 2 Test2 D10S1248 15 FALSE 5000 105 0.03
66 2 Test2 D10S1248 14 FALSE 5000 101 0.03
67 2 Test2 SE33 19 FALSE 5000 329 0.03
68 2 Test2 SE33 27.2 FALSE 5000 363 0.03
69 3 Test3 AMEL X FALSE 5000 82 0.03
70 3 Test3 AMEL X FALSE 5000 82 0.03
71 3 Test3 D3S1358 16 FALSE 5000 126 0.03
72 3 Test3 D3S1358 15 FALSE 5000 122 0.03
73 3 Test3 vWA 17 FALSE 5000 153 0.03
74 3 Test3 vWA 17 FALSE 5000 153 0.03
75 3 Test3 D16S539 12 FALSE 5000 301 0.03
76 3 Test3 D16S539 12 FALSE 5000 301 0.03
77 3 Test3 D2S1338 17 FALSE 5000 220 0.03
78 3 Test3 D2S1338 20 FALSE 5000 232 0.03
79 3 Test3 D8S1179 14 FALSE 5000 232 0.03
80 3 Test3 D8S1179 10 FALSE 5000 216 0.03
81 3 Test3 D21S11 28 FALSE 5000 215 0.03
82 3 Test3 D21S11 32.2 FALSE 5000 233 0.03
83 3 Test3 D18S51 15 FALSE 5000 313 0.03
84 3 Test3 D18S51 16 FALSE 5000 317 0.03
85 3 Test3 D19S433 14 FALSE 5000 227 0.03
86 3 Test3 D19S433 15 FALSE 5000 231 0.03
87 3 Test3 TH01 7 FALSE 5000 165 0.03
88 3 Test3 TH01 6 FALSE 5000 161 0.03
89 3 Test3 FGA 24 FALSE 5000 304 0.03
90 3 Test3 FGA 22 FALSE 5000 296 0.03
91 3 Test3 D12S391 22 FALSE 5000 165 0.03
92 3 Test3 D12S391 20 FALSE 5000 157 0.03
93 3 Test3 D1S1656 14 FALSE 5000 151 0.03
94 3 Test3 D1S1656 17 FALSE 5000 163 0.03
95 3 Test3 D22S1045 15 FALSE 5000 102 0.03
96 3 Test3 D22S1045 16 FALSE 5000 105 0.03
97 3 Test3 D2S441 11.3 FALSE 5000 103 0.03
98 3 Test3 D2S441 14 FALSE 5000 112 0.03
99 3 Test3 D10S1248 14 FALSE 5000 101 0.03
100 3 Test3 D10S1248 14 FALSE 5000 101 0.03
101 3 Test3 SE33 19 FALSE 5000 329 0.03
102 3 Test3 SE33 32.2 FALSE 5000 383 0.03
103 4 Test4 AMEL Y FALSE 5000 91 0.03
104 4 Test4 AMEL X FALSE 5000 82 0.03
105 4 Test4 D3S1358 16 FALSE 5000 126 0.03
106 4 Test4 D3S1358 15 FALSE 5000 122 0.03
107 4 Test4 vWA 16 FALSE 5000 149 0.03
108 4 Test4 vWA 16 FALSE 5000 149 0.03
109 4 Test4 D16S539 11 FALSE 5000 297 0.03
110 4 Test4 D16S539 14 FALSE 5000 309 0.03
111 4 Test4 D2S1338 24 FALSE 5000 248 0.03
112 4 Test4 D2S1338 23 FALSE 5000 244 0.03
113 4 Test4 D8S1179 14 FALSE 5000 232 0.03
114 4 Test4 D8S1179 12 FALSE 5000 224 0.03
115 4 Test4 D21S11 30 FALSE 5000 223 0.03
116 4 Test4 D21S11 30 FALSE 5000 223 0.03
117 4 Test4 D18S51 19 FALSE 5000 329 0.03
118 4 Test4 D18S51 15 FALSE 5000 313 0.03
119 4 Test4 D19S433 14 FALSE 5000 227 0.03
120 4 Test4 D19S433 12 FALSE 5000 219 0.03
121 4 Test4 TH01 6 FALSE 5000 161 0.03
122 4 Test4 TH01 9 FALSE 5000 173 0.03
123 4 Test4 FGA 27 FALSE 5000 316 0.03
124 4 Test4 FGA 23 FALSE 5000 300 0.03
125 4 Test4 D12S391 20 FALSE 5000 157 0.03
126 4 Test4 D12S391 17 FALSE 5000 145 0.03
127 4 Test4 D1S1656 11 FALSE 5000 139 0.03
128 4 Test4 D1S1656 14 FALSE 5000 151 0.03
129 4 Test4 D22S1045 11 FALSE 5000 90 0.03
130 4 Test4 D22S1045 16 FALSE 5000 105 0.03
131 4 Test4 D2S441 10 FALSE 5000 96 0.03
132 4 Test4 D2S441 12 FALSE 5000 104 0.03
133 4 Test4 D10S1248 15 FALSE 5000 105 0.03
134 4 Test4 D10S1248 14 FALSE 5000 101 0.03
135 4 Test4 SE33 16 FALSE 5000 317 0.03
136 4 Test4 SE33 19 FALSE 5000 329 0.03
137 5 Test5 AMEL Y FALSE 5000 91 0.03
138 5 Test5 AMEL X FALSE 5000 82 0.03
139 5 Test5 D3S1358 17 FALSE 5000 130 0.03
140 5 Test5 D3S1358 18 FALSE 5000 134 0.03
141 5 Test5 vWA 16 FALSE 5000 149 0.03
142 5 Test5 vWA 18 FALSE 5000 157 0.03
143 5 Test5 D16S539 12 FALSE 5000 301 0.03
144 5 Test5 D16S539 11 FALSE 5000 297 0.03
145 5 Test5 D2S1338 21 FALSE 5000 236 0.03
146 5 Test5 D2S1338 21 FALSE 5000 236 0.03
147 5 Test5 D8S1179 13 FALSE 5000 228 0.03
148 5 Test5 D8S1179 14 FALSE 5000 232 0.03
149 5 Test5 D21S11 32.2 FALSE 5000 233 0.03
150 5 Test5 D21S11 31.2 FALSE 5000 229 0.03
151 5 Test5 D18S51 19 FALSE 5000 329 0.03
152 5 Test5 D18S51 21 FALSE 5000 337 0.03
153 5 Test5 D19S433 14 FALSE 5000 227 0.03
154 5 Test5 D19S433 16.2 FALSE 5000 237 0.03
155 5 Test5 TH01 9 FALSE 5000 173 0.03
156 5 Test5 TH01 9.3 FALSE 5000 176 0.03
157 5 Test5 FGA 21 FALSE 5000 292 0.03
158 5 Test5 FGA 19 FALSE 5000 284 0.03
159 5 Test5 D12S391 22 FALSE 5000 165 0.03
160 5 Test5 D12S391 20 FALSE 5000 157 0.03
161 5 Test5 D1S1656 16.3 FALSE 5000 162 0.03
162 5 Test5 D1S1656 16 FALSE 5000 159 0.03
163 5 Test5 D22S1045 16 FALSE 5000 105 0.03
164 5 Test5 D22S1045 17 FALSE 5000 108 0.03
165 5 Test5 D2S441 14 FALSE 5000 112 0.03
166 5 Test5 D2S441 11 FALSE 5000 100 0.03
167 5 Test5 D10S1248 11 FALSE 5000 89 0.03
168 5 Test5 D10S1248 16 FALSE 5000 109 0.03
169 5 Test5 SE33 19 FALSE 5000 329 0.03
170 5 Test5 SE33 21.2 FALSE 5000 339 0.03
171 6 Test6 AMEL X FALSE 5000 82 0.03
172 6 Test6 AMEL Y FALSE 5000 91 0.03
173 6 Test6 D3S1358 19 FALSE 5000 138 0.03
174 6 Test6 D3S1358 17 FALSE 5000 130 0.03
175 6 Test6 vWA 16 FALSE 5000 149 0.03
176 6 Test6 vWA 14 FALSE 5000 141 0.03
177 6 Test6 D16S539 12 FALSE 5000 301 0.03
178 6 Test6 D16S539 11 FALSE 5000 297 0.03
179 6 Test6 D2S1338 22 FALSE 5000 240 0.03
180 6 Test6 D2S1338 23 FALSE 5000 244 0.03
181 6 Test6 D8S1179 14 FALSE 5000 232 0.03
182 6 Test6 D8S1179 15 FALSE 5000 236 0.03
183 6 Test6 D21S11 32.2 FALSE 5000 233 0.03
184 6 Test6 D21S11 29 FALSE 5000 219 0.03
185 6 Test6 D18S51 11 FALSE 5000 297 0.03
186 6 Test6 D18S51 16 FALSE 5000 317 0.03
187 6 Test6 D19S433 13 FALSE 5000 223 0.03
188 6 Test6 D19S433 14 FALSE 5000 227 0.03
189 6 Test6 TH01 9.3 FALSE 5000 176 0.03
190 6 Test6 TH01 7 FALSE 5000 165 0.03
191 6 Test6 FGA 22 FALSE 5000 296 0.03
192 6 Test6 FGA 22 FALSE 5000 296 0.03
193 6 Test6 D12S391 17 FALSE 5000 145 0.03
194 6 Test6 D12S391 21 FALSE 5000 161 0.03
195 6 Test6 D1S1656 16 FALSE 5000 159 0.03
196 6 Test6 D1S1656 11 FALSE 5000 139 0.03
197 6 Test6 D22S1045 16 FALSE 5000 105 0.03
198 6 Test6 D22S1045 15 FALSE 5000 102 0.03
199 6 Test6 D2S441 11 FALSE 5000 100 0.03
200 6 Test6 D2S441 11 FALSE 5000 100 0.03
201 6 Test6 D10S1248 13 FALSE 5000 97 0.03
202 6 Test6 D10S1248 17 FALSE 5000 113 0.03
203 6 Test6 SE33 25.2 FALSE 5000 355 0.03
204 6 Test6 SE33 19 FALSE 5000 329 0.03
205 7 Test7 AMEL Y FALSE 5000 91 0.03
206 7 Test7 AMEL X FALSE 5000 82 0.03
207 7 Test7 D3S1358 16 FALSE 5000 126 0.03
208 7 Test7 D3S1358 17 FALSE 5000 130 0.03
209 7 Test7 vWA 17 FALSE 5000 153 0.03
210 7 Test7 vWA 16 FALSE 5000 149 0.03
211 7 Test7 D16S539 9 FALSE 5000 289 0.03
212 7 Test7 D16S539 12 FALSE 5000 301 0.03
213 7 Test7 D2S1338 22 FALSE 5000 240 0.03
214 7 Test7 D2S1338 21 FALSE 5000 236 0.03
215 7 Test7 D8S1179 15 FALSE 5000 236 0.03
216 7 Test7 D8S1179 13 FALSE 5000 228 0.03
217 7 Test7 D21S11 31.2 FALSE 5000 229 0.03
218 7 Test7 D21S11 29 FALSE 5000 219 0.03
219 7 Test7 D18S51 12 FALSE 5000 301 0.03
220 7 Test7 D18S51 19 FALSE 5000 329 0.03
221 7 Test7 D19S433 16.2 FALSE 5000 237 0.03
222 7 Test7 D19S433 12 FALSE 5000 219 0.03
223 7 Test7 TH01 9 FALSE 5000 173 0.03
224 7 Test7 TH01 9.3 FALSE 5000 176 0.03
225 7 Test7 FGA 21 FALSE 5000 292 0.03
226 7 Test7 FGA 23 FALSE 5000 300 0.03
227 7 Test7 D12S391 21 FALSE 5000 161 0.03
228 7 Test7 D12S391 21 FALSE 5000 161 0.03
229 7 Test7 D1S1656 13 FALSE 5000 147 0.03
230 7 Test7 D1S1656 15 FALSE 5000 155 0.03
231 7 Test7 D22S1045 16 FALSE 5000 105 0.03
232 7 Test7 D22S1045 15 FALSE 5000 102 0.03
233 7 Test7 D2S441 14 FALSE 5000 112 0.03
234 7 Test7 D2S441 14 FALSE 5000 112 0.03
235 7 Test7 D10S1248 13 FALSE 5000 97 0.03
236 7 Test7 D10S1248 15 FALSE 5000 105 0.03
237 7 Test7 SE33 27.2 FALSE 5000 363 0.03
238 7 Test7 SE33 15 FALSE 5000 313 0.03
239 8 Test8 AMEL Y FALSE 5000 91 0.03
240 8 Test8 AMEL X FALSE 5000 82 0.03
241 8 Test8 D3S1358 16 FALSE 5000 126 0.03
242 8 Test8 D3S1358 15 FALSE 5000 122 0.03
243 8 Test8 vWA 17 FALSE 5000 153 0.03
244 8 Test8 vWA 15 FALSE 5000 145 0.03
245 8 Test8 D16S539 11 FALSE 5000 297 0.03
246 8 Test8 D16S539 12 FALSE 5000 301 0.03
247 8 Test8 D2S1338 26 FALSE 5000 256 0.03
248 8 Test8 D2S1338 17 FALSE 5000 220 0.03
249 8 Test8 D8S1179 14 FALSE 5000 232 0.03
250 8 Test8 D8S1179 16 FALSE 5000 240 0.03
251 8 Test8 D21S11 30 FALSE 5000 223 0.03
252 8 Test8 D21S11 32.2 FALSE 5000 233 0.03
253 8 Test8 D18S51 13 FALSE 5000 305 0.03
254 8 Test8 D18S51 20 FALSE 5000 333 0.03
255 8 Test8 D19S433 13 FALSE 5000 223 0.03
256 8 Test8 D19S433 15.2 FALSE 5000 233 0.03
257 8 Test8 TH01 9 FALSE 5000 173 0.03
258 8 Test8 TH01 6 FALSE 5000 161 0.03
259 8 Test8 FGA 25 FALSE 5000 308 0.03
260 8 Test8 FGA 21 FALSE 5000 292 0.03
261 8 Test8 D12S391 18 FALSE 5000 149 0.03
262 8 Test8 D12S391 20 FALSE 5000 157 0.03
263 8 Test8 D1S1656 17.3 FALSE 5000 166 0.03
264 8 Test8 D1S1656 14 FALSE 5000 151 0.03
265 8 Test8 D22S1045 16 FALSE 5000 105 0.03
266 8 Test8 D22S1045 15 FALSE 5000 102 0.03
267 8 Test8 D2S441 11 FALSE 5000 100 0.03
268 8 Test8 D2S441 11 FALSE 5000 100 0.03
269 8 Test8 D10S1248 14 FALSE 5000 101 0.03
270 8 Test8 D10S1248 13 FALSE 5000 97 0.03
271 8 Test8 SE33 22 FALSE 5000 341 0.03
272 8 Test8 SE33 32.2 FALSE 5000 383 0.03
273 9 Test9 AMEL X FALSE 5000 82 0.03
274 9 Test9 AMEL X FALSE 5000 82 0.03
275 9 Test9 D3S1358 16 FALSE 5000 126 0.03
276 9 Test9 D3S1358 15 FALSE 5000 122 0.03
277 9 Test9 vWA 18 FALSE 5000 157 0.03
278 9 Test9 vWA 18 FALSE 5000 157 0.03
279 9 Test9 D16S539 8 FALSE 5000 285 0.03
280 9 Test9 D16S539 11 FALSE 5000 297 0.03
281 9 Test9 D2S1338 17 FALSE 5000 220 0.03
282 9 Test9 D2S1338 25 FALSE 5000 252 0.03
283 9 Test9 D8S1179 12 FALSE 5000 224 0.03
284 9 Test9 D8S1179 12 FALSE 5000 224 0.03
285 9 Test9 D21S11 32.2 FALSE 5000 233 0.03
286 9 Test9 D21S11 29 FALSE 5000 219 0.03
287 9 Test9 D18S51 17 FALSE 5000 321 0.03
288 9 Test9 D18S51 14 FALSE 5000 309 0.03
289 9 Test9 D19S433 14 FALSE 5000 227 0.03
290 9 Test9 D19S433 13 FALSE 5000 223 0.03
291 9 Test9 TH01 7 FALSE 5000 165 0.03
292 9 Test9 TH01 6 FALSE 5000 161 0.03
293 9 Test9 FGA 22 FALSE 5000 296 0.03
294 9 Test9 FGA 25 FALSE 5000 308 0.03
295 9 Test9 D12S391 17 FALSE 5000 145 0.03
296 9 Test9 D12S391 21 FALSE 5000 161 0.03
297 9 Test9 D1S1656 14 FALSE 5000 151 0.03
298 9 Test9 D1S1656 14 FALSE 5000 151 0.03
299 9 Test9 D22S1045 11 FALSE 5000 90 0.03
300 9 Test9 D22S1045 16 FALSE 5000 105 0.03
301 9 Test9 D2S441 14 FALSE 5000 112 0.03
302 9 Test9 D2S441 14 FALSE 5000 112 0.03
303 9 Test9 D10S1248 13 FALSE 5000 97 0.03
304 9 Test9 D10S1248 14 FALSE 5000 101 0.03
305 9 Test9 SE33 22.2 FALSE 5000 343 0.03
306 9 Test9 SE33 12.2 FALSE 5000 303 0.03
307 10 Test10 AMEL Y FALSE 5000 91 0.03
308 10 Test10 AMEL X FALSE 5000 82 0.03
309 10 Test10 D3S1358 14 FALSE 5000 118 0.03
310 10 Test10 D3S1358 14 FALSE 5000 118 0.03
311 10 Test10 vWA 18 FALSE 5000 157 0.03
312 10 Test10 vWA 14 FALSE 5000 141 0.03
313 10 Test10 D16S539 11 FALSE 5000 297 0.03
314 10 Test10 D16S539 11 FALSE 5000 297 0.03
315 10 Test10 D2S1338 24 FALSE 5000 248 0.03
316 10 Test10 D2S1338 21 FALSE 5000 236 0.03
317 10 Test10 D8S1179 9 FALSE 5000 212 0.03
318 10 Test10 D8S1179 14 FALSE 5000 232 0.03
319 10 Test10 D21S11 33 FALSE 5000 235 0.03
320 10 Test10 D21S11 29 FALSE 5000 219 0.03
321 10 Test10 D18S51 22 FALSE 5000 341 0.03
322 10 Test10 D18S51 20 FALSE 5000 333 0.03
323 10 Test10 D19S433 14 FALSE 5000 227 0.03
324 10 Test10 D19S433 14 FALSE 5000 227 0.03
325 10 Test10 TH01 7 FALSE 5000 165 0.03
326 10 Test10 TH01 6 FALSE 5000 161 0.03
327 10 Test10 FGA 23 FALSE 5000 300 0.03
328 10 Test10 FGA 22 FALSE 5000 296 0.03
329 10 Test10 D12S391 16 FALSE 5000 141 0.03
330 10 Test10 D12S391 20 FALSE 5000 157 0.03
331 10 Test10 D1S1656 15 FALSE 5000 155 0.03
332 10 Test10 D1S1656 17 FALSE 5000 163 0.03
333 10 Test10 D22S1045 17 FALSE 5000 108 0.03
334 10 Test10 D22S1045 17 FALSE 5000 108 0.03
335 10 Test10 D2S441 14 FALSE 5000 112 0.03
336 10 Test10 D2S441 12 FALSE 5000 104 0.03
337 10 Test10 D10S1248 14 FALSE 5000 101 0.03
338 10 Test10 D10S1248 15 FALSE 5000 105 0.03
339 10 Test10 SE33 19 FALSE 5000 329 0.03
340 10 Test10 SE33 14 FALSE 5000 309 0.03
Deg.Prob Deg.DNA DNA
1 9.409000e-01 4675 4675
2 9.409000e-01 4704 4704
3 2.463201e-01 1205 1205
4 1.930517e-01 952 952
5 1.222502e-01 581 581
6 1.082272e-01 545 545
7 1.192761e-03 6 6
8 1.941805e-03 10 10
9 1.102089e-02 54 54
10 1.406186e-02 72 72
11 8.637549e-03 42 42
12 7.646760e-03 42 42
13 1.069026e-02 47 47
14 1.283388e-02 62 62
15 7.326575e-04 3 3
16 8.275878e-04 5 5
17 1.005847e-02 50 50
18 1.449676e-02 82 82
19 6.647898e-02 342 342
20 5.371388e-02 283 283
21 7.553170e-04 7 7
22 1.088600e-03 7 7
23 9.581280e-02 461 461
24 1.082272e-01 547 547
25 1.657801e-01 830 830
26 9.015026e-02 420 420
27 5.116561e-01 2593 2593
28 4.669747e-01 2288 2288
29 6.142537e-01 3024 3024
30 5.437943e-01 2695 2695
31 4.134093e-01 2101 2101
32 5.958260e-01 3036 3036
33 1.414408e-04 0 0
34 1.414408e-04 0 0
35 9.409000e-01 4699 4699
36 7.153014e-01 3560 3560
37 2.782357e-01 1377 1377
38 2.180654e-01 1055 1055
39 9.581280e-02 477 477
40 1.559825e-01 811 811
41 1.521876e-03 6 6
42 1.192761e-03 8 8
43 1.406186e-02 71 71
44 7.646760e-03 44 44
45 9.756715e-03 27 27
46 1.102089e-02 56 56
47 1.449676e-02 68 68
48 1.207540e-02 41 41
49 8.275878e-04 7 7
50 8.275878e-04 1 1
51 1.449676e-02 64 64
52 1.283388e-02 69 69
53 7.509265e-02 353 353
54 7.509265e-02 379 379
55 1.568945e-03 10 10
56 1.772233e-03 10 10
57 9.581280e-02 468 468
58 5.885336e-02 302 302
59 7.283987e-02 349 349
60 1.299290e-01 645 645
61 4.669747e-01 2392 2392
62 4.261952e-01 2136 2136
63 4.814172e-01 2405 2405
64 3.773076e-01 1871 1871
65 4.669747e-01 2357 2357
66 5.274805e-01 2608 2608
67 5.083488e-04 4 4
68 1.804682e-04 0 0
69 9.409000e-01 4697 4697
70 9.409000e-01 4693 4693
71 2.463201e-01 1247 1247
72 2.782357e-01 1378 1378
73 1.082272e-01 525 525
74 1.082272e-01 530 530
75 1.192761e-03 6 6
76 1.192761e-03 6 6
77 1.406186e-02 80 80
78 9.756715e-03 59 59
79 9.756715e-03 51 51
80 1.588385e-02 69 69
81 1.637511e-02 76 76
82 9.464013e-03 64 64
83 8.275878e-04 6 6
84 7.326575e-04 2 2
85 1.136174e-02 71 71
86 1.005847e-02 46 46
87 7.509265e-02 363 363
88 8.482238e-02 448 448
89 1.088600e-03 5 5
90 1.388976e-03 12 12
91 7.509265e-02 359 359
92 9.581280e-02 496 496
93 1.150252e-01 601 601
94 7.980938e-02 386 386
95 5.116561e-01 2515 2515
96 4.669747e-01 2345 2345
97 4.963064e-01 2517 2517
98 3.773076e-01 1853 1853
99 5.274805e-01 2618 2618
100 5.274805e-01 2591 2591
101 5.083488e-04 3 3
102 9.813761e-05 0 0
103 7.153014e-01 3574 3574
104 9.409000e-01 4703 4703
105 2.463201e-01 1167 1167
106 2.782357e-01 1374 1374
107 1.222502e-01 628 628
108 1.222502e-01 600 600
109 1.347306e-03 3 3
110 9.348182e-04 5 5
111 5.993098e-03 39 39
112 6.769622e-03 30 30
113 9.756715e-03 55 55
114 1.244886e-02 57 57
115 1.283388e-02 59 59
116 1.283388e-02 64 64
117 5.083488e-04 3 3
118 8.275878e-04 7 7
119 1.136174e-02 57 57
120 1.449676e-02 69 69
121 8.482238e-02 423 423
122 5.885336e-02 286 286
123 7.553170e-04 6 6
124 1.229650e-03 1 1
125 9.581280e-02 478 478
126 1.380902e-01 651 651
127 1.657801e-01 825 825
128 1.150252e-01 542 542
129 7.374241e-01 3626 3626
130 4.669747e-01 2352 2352
131 6.142537e-01 3044 3044
132 4.814172e-01 2429 2429
133 4.669747e-01 2356 2356
134 5.274805e-01 2607 2607
135 7.326575e-04 0 0
136 5.083488e-04 2 2
137 7.153014e-01 3534 3534
138 9.409000e-01 4712 4712
139 2.180654e-01 1076 1076
140 1.930517e-01 994 994
141 1.222502e-01 599 599
142 9.581280e-02 495 495
143 1.192761e-03 4 4
144 1.347306e-03 1 1
145 8.637549e-03 39 39
146 8.637549e-03 49 49
147 1.102089e-02 48 48
148 9.756715e-03 55 55
149 9.464013e-03 53 53
150 1.069026e-02 54 54
151 5.083488e-04 2 2
152 3.984150e-04 1 1
153 1.136174e-02 56 56
154 8.378423e-03 40 40
155 5.885336e-02 271 271
156 5.371388e-02 284 284
157 1.568945e-03 6 6
158 2.001860e-03 7 7
159 7.509265e-02 397 397
160 9.581280e-02 478 478
161 8.227771e-02 424 424
162 9.015026e-02 460 460
163 4.669747e-01 2327 2327
164 4.261952e-01 2162 2162
165 3.773076e-01 1859 1859
166 5.437943e-01 2764 2764
167 7.602311e-01 3767 3767
168 4.134093e-01 2130 2130
169 5.083488e-04 3 3
170 3.748687e-04 1 1
171 9.409000e-01 4668 4668
172 7.153014e-01 3601 3601
173 1.709073e-01 814 814
174 2.180654e-01 1090 1090
175 1.222502e-01 641 641
176 1.559825e-01 782 782
177 1.192761e-03 6 6
178 1.347306e-03 13 13
179 7.646760e-03 34 34
180 6.769622e-03 30 30
181 9.756715e-03 60 60
182 8.637549e-03 35 35
183 9.464013e-03 44 44
184 1.449676e-02 62 62
185 1.347306e-03 6 6
186 7.326575e-04 5 5
187 1.283388e-02 54 54
188 1.136174e-02 69 69
189 5.371388e-02 297 297
190 7.509265e-02 390 390
191 1.388976e-03 4 4
192 1.388976e-03 9 9
193 1.380902e-01 724 724
194 8.482238e-02 425 425
195 9.015026e-02 404 404
196 1.657801e-01 811 811
197 4.669747e-01 2316 2316
198 5.116561e-01 2497 2497
199 5.437943e-01 2766 2766
200 5.437943e-01 2806 2806
201 5.958260e-01 3003 3003
202 3.659883e-01 1771 1771
203 2.302645e-04 2 2
204 5.083488e-04 0 0
205 7.153014e-01 3565 3565
206 9.409000e-01 4711 4711
207 2.463201e-01 1174 1174
208 2.180654e-01 1088 1088
209 1.082272e-01 515 515
210 1.222502e-01 580 580
211 1.719066e-03 7 7
212 1.192761e-03 2 2
213 7.646760e-03 36 36
214 8.637549e-03 43 43
215 8.637549e-03 42 42
216 1.102089e-02 49 49
217 1.069026e-02 61 61
218 1.449676e-02 65 65
219 1.192761e-03 8 8
220 5.083488e-04 1 1
221 8.378423e-03 57 57
222 1.449676e-02 61 61
223 5.885336e-02 303 303
224 5.371388e-02 257 257
225 1.568945e-03 11 11
226 1.229650e-03 9 9
227 8.482238e-02 430 430
228 8.482238e-02 434 434
229 1.299290e-01 617 617
230 1.018310e-01 536 536
231 4.669747e-01 2399 2399
232 5.116561e-01 2575 2575
233 3.773076e-01 1894 1894
234 3.773076e-01 1968 1968
235 5.958260e-01 2966 2966
236 4.669747e-01 2287 2287
237 1.804682e-04 1 1
238 8.275878e-04 1 1
239 7.153014e-01 3657 3657
240 9.409000e-01 4709 4709
241 2.463201e-01 1219 1219
242 2.782357e-01 1448 1448
243 1.082272e-01 497 497
244 1.380902e-01 675 675
245 1.347306e-03 3 3
246 1.192761e-03 1 1
247 4.697051e-03 26 26
248 1.406186e-02 63 63
249 9.756715e-03 45 45
250 7.646760e-03 40 40
251 1.283388e-02 52 52
252 9.464013e-03 45 45
253 1.055942e-03 4 4
254 4.500376e-04 0 0
255 1.283388e-02 68 68
256 9.464013e-03 46 46
257 5.885336e-02 270 270
258 8.482238e-02 455 455
259 9.637301e-04 5 5
260 1.568945e-03 11 11
261 1.222502e-01 601 601
262 9.581280e-02 495 495
263 7.283987e-02 367 367
264 1.150252e-01 585 585
265 4.669747e-01 2356 2356
266 5.116561e-01 2557 2557
267 5.437943e-01 2637 2637
268 5.437943e-01 2755 2755
269 5.274805e-01 2663 2663
270 5.958260e-01 3016 3016
271 3.527140e-04 2 2
272 9.813761e-05 0 0
273 9.409000e-01 4675 4675
274 9.409000e-01 4703 4703
275 2.463201e-01 1229 1229
276 2.782357e-01 1392 1392
277 9.581280e-02 435 435
278 9.581280e-02 472 472
279 1.941805e-03 13 13
280 1.347306e-03 9 9
281 1.406186e-02 59 59
282 5.305646e-03 28 28
283 1.244886e-02 67 67
284 1.244886e-02 75 75
285 9.464013e-03 54 54
286 1.449676e-02 66 66
287 6.486164e-04 5 5
288 9.348182e-04 3 3
289 1.136174e-02 58 58
290 1.283388e-02 50 50
291 7.509265e-02 362 362
292 8.482238e-02 404 404
293 1.388976e-03 12 12
294 9.637301e-04 2 2
295 1.380902e-01 695 695
296 8.482238e-02 449 449
297 1.150252e-01 599 599
298 1.150252e-01 525 525
299 7.374241e-01 3684 3684
300 4.669747e-01 2349 2349
301 3.773076e-01 1939 1939
302 3.773076e-01 1883 1883
303 5.958260e-01 3015 3015
304 5.274805e-01 2678 2678
305 3.318686e-04 3 3
306 1.122268e-03 5 5
307 7.153014e-01 3564 3564
308 9.409000e-01 4701 4701
309 3.142866e-01 1570 1570
310 3.142866e-01 1582 1582
311 9.581280e-02 529 529
312 1.559825e-01 800 800
313 1.347306e-03 5 5
314 1.347306e-03 11 11
315 5.993098e-03 34 34
316 8.637549e-03 41 41
317 1.794192e-02 103 103
318 9.756715e-03 51 51
319 8.904690e-03 52 52
320 1.449676e-02 75 75
321 3.527140e-04 3 3
322 4.500376e-04 5 5
323 1.136174e-02 55 55
324 1.136174e-02 59 59
325 7.509265e-02 415 415
326 8.482238e-02 423 423
327 1.229650e-03 3 3
328 1.388976e-03 3 3
329 1.559825e-01 803 803
330 9.581280e-02 451 451
331 1.018310e-01 521 521
332 7.980938e-02 390 390
333 4.261952e-01 2203 2203
334 4.261952e-01 2143 2143
335 3.773076e-01 1827 1827
336 4.814172e-01 2390 2390
337 5.274805e-01 2592 2592
338 4.669747e-01 2365 2365
339 5.083488e-04 0 0
340 9.348182e-04 7 7
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