load_mpa_df: Load a metaphlan format data.frame
In pctax: Professional Comprehensive Omics Data Analysis
load_mpa_df R Documentation
Load a metaphlan format data.frame
Description
Load a metaphlan format data.frame
Usage
load_mpa_df(mpa_df, sum_unidentified = TRUE, rank_prefixes = pc_rank_prefixes)
Arguments
mpa_df
metaphlan format data.frame, rownames are taxon, all value are numeric.
sum_unidentified
logical, whether to sum the unidentified reads to the correspond level.
rank_prefixes
a named vector of rank prefixes, default is pc_rank_prefixes.
Value
a list
pctax documentation built on Feb. 9, 2026, 9:06 a.m.
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| load_mpa_df | R Documentation |
Load a metaphlan format data.frame
Description
Load a metaphlan format data.frame
Usage
load_mpa_df(mpa_df, sum_unidentified = TRUE, rank_prefixes = pc_rank_prefixes)
Arguments
mpa_df |
metaphlan format data.frame, rownames are taxon, all value are numeric. |
sum_unidentified |
logical, whether to sum the unidentified reads to the correspond level. |
rank_prefixes |
a named vector of rank prefixes, default is |
Value
a list
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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