areSynonymous.CodonAlphabet: Check whether two codons are synonymous

In phylosim: Flexible Simulations of Biological Sequence Evolution

Description

Check whether two codons are synonymous.

Usage

## S3 method for class 'CodonAlphabet'
areSynonymous(this, codons, ...)

Arguments

this	A CodonAlphabet object.
codons	A vector containing two codons.
...	Not used.

Value

TRUE or FALSE.

Author(s)

Botond Sipos, Gregory Jordan

See Also

For more information see CodonAlphabet.

Examples

	# create a CodonAlphabet object
	a<-CodonAlphabet()
	areSynonymous(a,c("TCC","TCT"))
	areSynonymous(a,c("TCC","CCT"))
 

phylosim documentation built on Nov. 22, 2019, 1:07 a.m.