getEdges.PhyloSim: Get the edge matrix from a phylo object aggregated by a...

In phylosim: Flexible Simulations of Biological Sequence Evolution

Description

Get the edge matrix from a phylo object aggregated by a PhyloSim object.

The rows of the edge matrix contain the nodes connected by the edge and the edge length.

Usage

## S3 method for class 'PhyloSim'
getEdges(this, ...)

Arguments

this	A PhyloSim object.
...	Not used.

Value

A matrix.

Author(s)

Botond Sipos, Gregory Jordan

See Also

For more information see PhyloSim.

Examples

	# create a PhyloSim object
	sim<-PhyloSim(phylo=rcoal(5));
	# get the edge matrix
	getEdges(sim)
	# get the edge matrix via virtual field
	sim$edges
 

phylosim documentation built on Nov. 22, 2019, 1:07 a.m.