getRateParam.GTR: Get the value of a rate parameter

In phylosim: Flexible Simulations of Biological Sequence Evolution

Description

Get the value of a rate parameter.

The rate parameters are named as in PAML (see PAML documentation: http://bit.ly/9SQK2f).

Usage

## S3 method for class 'GTR'
getRateParam(this, name, ...)

Arguments

this	A GTR object.
name	The name of the rate parameter.
...	Not used.

Value

A numeric vector of length one.

Author(s)

Botond Sipos, Gregory Jordan

See Also

For more information see GTR.

Examples

	# construct a GTR object
	p<-GTR();
	# set/get a rate parameter
	setRateParam(p,"a",4)
	getRateParam(p,"a")
	# get object summary
	summary(p)
 

phylosim documentation built on Nov. 22, 2019, 1:07 a.m.