setAlphabet.Process: Assotiate an Alphabet object with a Process object

In phylosim: Flexible Simulations of Biological Sequence Evolution

Description

Assotiate an Alphabet object with a Process object.

Usage

## S3 method for class 'Process'
setAlphabet(this, new.alphabet, ...)

Arguments

this	A Process object.
new.alphabet	A valid Alphabet object.
...	Not used.

Value

The Alphabet object (invisible).

Author(s)

Botond Sipos, Gregory Jordan

See Also

For more information see Process.

Examples

	# create objects
	a<-AminoAcidAlphabet()
	p<-Process()
	# assotiate p with Alphabet object a
	setAlphabet(p,a)
	p$alphabet
	# assotiate p with a new NucleotideAlphabet via virtual field
	p$alphabet<-NucleotideAlphabet()
	p$alphabet
 

phylosim documentation built on Nov. 22, 2019, 1:07 a.m.