setKappa.F84: Get the transition transversion rate ratio

In phylosim: Flexible Simulations of Biological Sequence Evolution

Description

Get the transition transversion rate ratio.

Usage

## S3 method for class 'F84'
setKappa(this, value, ...)

Arguments

this	A F84 object.
value	A numeric vector of length one.
...	Not used.

Value

The new value of Kappa (invisible).

Author(s)

Botond Sipos, Gregory Jordan

See Also

For more information see F84.

Examples

       # construct a F84 object
       p<-F84();
	# set/get Kappa
	setKappa(p,2)
	getKappa(p)
	# set/get Kappa via virtual field
	p$kappa<-4
	p$kappa
	# get object summary
	summary(p)
 

phylosim documentation built on Nov. 22, 2019, 1:07 a.m.