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phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
A pipeline for the identification, within taxonomic groups, of orthologous sequence clusters from 'GenBank' <https://www.ncbi.nlm.nih.gov/genbank/> as the first step in a phylogenetic analysis. The pipeline depends on a local alignment search tool and is, therefore, not dependent on differences in gene naming conventions and naming errors.
Getting started
Browse package contents
Package details |
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| Author | Hannes Hettling [aut], Rutger Vos [aut], Alexander Zizka [aut], Dom Bennett [aut, cre], Alexandre Antonelli [aut] |
| Maintainer | Dom Bennett <dominic.john.bennett@gmail.com> |
| License | MIT + file LICENSE |
| Version | 1.0.0 |
| URL | https://github.com/ropensci/phylotaR#readme |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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