phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'

A pipeline for the identification, within taxonomic groups, of orthologous sequence clusters from 'GenBank' <> as the first step in a phylogenetic analysis. The pipeline depends on a local alignment search tool and is, therefore, not dependent on differences in gene naming conventions and naming errors.

Package details

AuthorHannes Hettling [aut], Rutger Vos [aut], Alexander Zizka [aut], Dom Bennett [aut, cre], Alexandre Antonelli [aut]
MaintainerDom Bennett <[email protected]>
LicenseMIT + file LICENSE
Package repositoryView on CRAN
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phylotaR documentation built on July 31, 2018, 5:01 p.m.