get_stage_times: Get run times for different stages

In phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'

Description

Get slot data for taxa(s)

Usage

get_stage_times(wd)

Arguments

wd	Working directory

Value

list of runtimes in minutes

See Also

Other tools-public: calc_mad, calc_wrdfrq, drop_by_rank, drop_clstrs, drop_sqs, get_clstr_slot, get_nsqs, get_ntaxa, get_sq_slot, get_tx_slot, get_txids, is_txid_in_clstr, is_txid_in_sq, list_clstrrec_slots, list_ncbi_ranks, list_seqrec_slots, list_taxrec_slots, plot_phylota_pa, plot_phylota_treemap, read_phylota, write_sqs

Examples

## Not run: 
  
  # Note, this example requires a wd with a completed phylotaR run
  # return a named list of the time take in minutes for each stage
  get_stage_times(wd = wd)

## End(Not run)

phylotaR documentation built on May 1, 2019, 9:26 p.m.