Description Usage Arguments Value See Also Examples
Get slot data for taxa(s)
1 | get_tx_slot(phylota, txid, slt_nm = list_taxrec_slots())
|
phylota |
Phylota object |
txid |
Taxonomic ID |
slt_nm |
Slot name |
vector or list
Other tools-public: calc_mad
,
calc_wrdfrq
, drop_by_rank
,
drop_clstrs
, drop_sqs
,
get_clstr_slot
, get_nsqs
,
get_ntaxa
, get_sq_slot
,
get_stage_times
, get_txids
,
is_txid_in_clstr
,
is_txid_in_sq
,
list_clstrrec_slots
,
list_ncbi_ranks
,
list_seqrec_slots
,
list_taxrec_slots
,
plot_phylota_pa
,
plot_phylota_treemap
,
read_phylota
, write_sqs
1 2 3 4 5 | data('aotus')
random_txid <- sample(aotus@txids, 1)
(get_tx_slot(phylota = aotus, txid = random_txid, slt_nm = 'scnm'))
# see list_taxrec_slots() for available slots
(list_taxrec_slots())
|
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