API for pliman
Tools for Plant Image Analysis

Global functions
%>%	Man page
.onAttach	Source code
.onLoad	Source code
`%>%`	Source code
analyze_objects	Man page Source code
analyze_objects_iter	Man page Source code
analyze_objects_shp	Man page Source code
apply_fun_to_imgs	Man page Source code
as_image	Man page Source code
bounding_box	Source code
calibrate	Man page Source code
check_ebi	Source code
check_inf	Source code
check_mapview	Source code
check_names_dir	Source code
clear_td	Source code
cm_to_dpi	Man page Source code
cm_to_pixels	Man page Source code
column_to_rownames	Man page Source code
contours	Man page
conv_hull	Man page Source code
conv_hull_unified	Man page Source code
correct_coords	Source code
create_mat	Source code
custom_palette	Man page Source code
dist_transform	Man page Source code
distance	Man page Source code
dpi	Man page Source code
dpi_to_cm	Man page Source code
draw_circle	Man page Source code
draw_n_tagon	Man page Source code
draw_rectangle	Man page Source code
draw_square	Man page Source code
draw_trian_equi	Man page Source code
draw_trian_rect	Man page Source code
efourier	Man page Source code
efourier_coefs	Man page Source code
efourier_error	Man page Source code
efourier_inv	Man page Source code
efourier_norm	Man page Source code
efourier_power	Man page Source code
efourier_shape	Man page Source code
ellipse	Man page Source code
file_dir	Man page Source code
file_extension	Man page Source code
file_name	Man page Source code
get_area_mask	Source code
get_biplot	Man page Source code
get_measures	Man page Source code
get_pliman_viewer	Man page Source code
get_rgb	Source code
get_wd_here	Man page Source code
ggplot_color	Man page Source code
help_align	Source code
help_angle	Source code
help_area	Source code
help_binary	Source code
help_calliper	Source code
help_centdist	Source code
help_dist_transform	Source code
help_distpts	Source code
help_edge_thinning	Source code
help_eigen_ratio	Source code
help_elongation	Source code
help_flip_x	Source code
help_flip_y	Source code
help_get_renir	Source code
help_get_rgb	Source code
help_imageindex	Source code
help_isolate_object	Source code
help_limits	Source code
help_lw	Source code
help_mc	Source code
help_moments	Source code
help_otsu	Source code
help_poly_angles	Source code
help_rotate	Source code
help_segment	Source code
help_shp	Source code
help_slide	Source code
help_smoth	Source code
help_watershed	Source code
helper_guo_hall	Source code
image_align	Man page Source code
image_augment	Man page Source code
image_autocrop	Man page Source code
image_binary	Man page Source code
image_blur	Man page Source code
image_closing	Man page Source code
image_combine	Man page Source code
image_contrast	Man page Source code
image_create	Man page Source code
image_crop	Man page Source code
image_dilate	Man page Source code
image_dimension	Man page Source code
image_erode	Man page Source code
image_expand	Man page Source code
image_export	Man page Source code
image_filter	Man page Source code
image_horizontal	Man page Source code
image_hreflect	Man page Source code
image_import	Man page Source code
image_index	Man page Source code
image_opening	Man page Source code
image_orientation	Source code
image_palette	Man page
image_pliman	Man page Source code
image_prepare	Man page Source code
image_resize	Man page Source code
image_rotate	Man page Source code
image_segment	Man page Source code
image_segment_iter	Man page Source code
image_segment_kmeans	Man page
image_segment_manual	Man page Source code
image_segment_mask	Man page Source code
image_shp	Man page Source code
image_skeleton	Man page Source code
image_square	Man page Source code
image_thinning	Man page Source code
image_thinning_guo_hall	Man page Source code
image_to_mat	Man page Source code
image_trim	Man page Source code
image_vertical	Man page Source code
image_view	Man page Source code
image_vreflect	Man page Source code
insert_dot	Source code
isolate_objects5	Source code
landmarks	Man page Source code
landmarks_add	Man page Source code
landmarks_angle	Man page Source code
landmarks_dist	Man page Source code
landmarks_regradi	Man page Source code
leading_zeros	Man page Source code
make_brush	Man page Source code
make_mask	Man page Source code
manipulate_files	Man page Source code
max_list	Man page
mean_list	Man page
measure_disease	Man page Source code
measure_disease_byl	Man page Source code
measure_disease_iter	Man page Source code
measure_disease_shp	Man page Source code
min_list	Man page
mosaic_crop	Man page Source code
mosaic_export	Man page Source code
mosaic_index	Man page Source code Source code
mosaic_input	Man page Source code
mosaic_prepare	Man page Source code
mosaic_to_pliman	Man page Source code
mosaic_to_rgb	Man page Source code
mosaic_view	Man page Source code
mv_points	Source code
mv_polygon	Source code
mv_rectangle	Source code
mv_two_points	Source code
npixels	Man page Source code
object_contour	Man page Source code
object_coord	Man page Source code
object_edge	Man page Source code
object_export	Man page Source code
object_export_shp	Man page Source code
object_id	Man page Source code
object_isolate	Man page Source code
object_label	Man page Source code
object_map	Man page Source code
object_mark	Man page Source code
object_rgb	Man page Source code
object_split	Man page Source code
object_split_shp	Man page Source code
object_to_color	Man page Source code
open_wd	Man page Source code
open_wd_here	Man page Source code
otsu	Man page Source code
palettes	Man page
pca	Man page Source code
pick_coords	Man page Source code
pick_count	Man page Source code
pick_palette	Man page Source code
pick_rgb	Man page Source code
pipe	Man page
pixel_index	Man page Source code
pixels_to_cm	Man page Source code
pliman_images	Man page
pliman_indexes	Man page Source code
pliman_indexes_eq	Man page Source code
pliman_viewer	Man page
plot.anal_obj	Man page Source code
plot.image_index	Man page Source code
plot.image_shp	Man page Source code
plot.pca	Man page Source code
plot_contour	Man page Source code
plot_ellipse	Man page Source code
plot_index	Man page Source code
plot_index_shp	Man page Source code
plot_lw	Man page Source code
plot_mass	Man page Source code
plot_measures	Man page Source code
plot_polygon	Man page Source code
plot_shp	Source code
poly_align	Man page Source code
poly_angles	Man page Source code
poly_apex_base_angle	Man page Source code
poly_area	Man page Source code
poly_caliper	Man page Source code
poly_centdist	Man page Source code
poly_center	Man page Source code
poly_check	Man page Source code
poly_circularity	Man page Source code
poly_circularity_haralick	Man page Source code
poly_circularity_norm	Man page Source code
poly_close	Man page Source code
poly_convexity	Man page Source code
poly_distpts	Man page Source code
poly_eccentricity	Man page Source code
poly_elongation	Man page Source code
poly_flip_x	Man page Source code
poly_flip_y	Man page Source code
poly_is_closed	Man page Source code
poly_jitter	Man page Source code
poly_limits	Man page Source code
poly_lw	Man page Source code
poly_mass	Man page Source code
poly_measures	Man page Source code
poly_pcv	Man page Source code
poly_perimeter	Man page Source code
poly_rotate	Man page Source code
poly_sample	Man page Source code
poly_sample_prop	Man page Source code
poly_slide	Man page Source code
poly_smooth	Man page Source code
poly_solidity	Man page Source code
poly_spline	Man page Source code
poly_unclose	Man page Source code
poly_width_at	Man page Source code
polygon_to_binary	Source code
prepare_to_shp	Man page Source code
progress	Source code
random_color	Man page Source code
reduce_dimensions	Source code
remove_rownames	Man page Source code
rgb_to_hsb	Man page Source code
rgb_to_hsb_help	Source code
rgb_to_lab	Man page Source code
rgb_to_srgb	Man page Source code
rgb_to_srgb_help	Source code
round_cols	Man page Source code
rownames_to_column	Man page Source code
run_progress	Source code
sad	Man page Source code
sd_list	Man page
sec_to_hms	Source code
separate_col	Man page Source code
set_pliman_viewer	Man page Source code
set_wd_here	Man page Source code
sobel_help	Source code
sum_true_cols	Source code
summary_index	Man page Source code
threshold_adaptive	Source code
utils_colorspace	Man page
utils_dpi	Man page
utils_file	Man page
utils_image	Man page
utils_measures	Man page
utils_objects	Man page
utils_pca	Man page
utils_pick	Man page
utils_polygon	Man page
utils_polygon_plot	Man page
utils_rows_cols	Man page
utils_shapes	Man page
utils_stats	Man page
utils_transform	Man page
utils_wd	Man page
watershed2	Man page Source code