bootgen-methods: Methods used for the bootgen object.

In poppr: Genetic Analysis of Populations with Mixed Reproduction

Methods used for the bootgen object.

Description

This is not designed for user interaction.

Usage

## S4 method for signature 'bootgen,ANY,ANY,ANY'
x[i, j, ..., drop = FALSE]

## S4 method for signature 'bootgen'
dim(x)

## S4 method for signature 'bootgen'
x$name

## S4 method for signature 'bootgen'
initialize(.Object, gen, na = "mean", freq = TRUE)

Arguments

x	a "bootgen" object
i	vector of numerics indicating number of individuals desired
j	a vector of numerics corresponding to the loci desired.
...	unused.
drop	set to FALSE
.Object	a character, "bootgen"
gen	a genind, genclone, or genpop object
na	how missing data should be treated. Default is "mean", averaging over other values in the matrix. Possible values are listed in tab.
freq	if TRUE, the matrix will be a genotype frequency matrix. If FALSE, the matrix will be allele counts.

Author(s)

Zhian N. Kamvar

poppr documentation built on June 19, 2025, 1:08 a.m.