An example dataset containing 14 variants from 49 genome samples that has been annotated using snpeff.
vcfR class object with three sections:
The metadata for the VCF file including the file format version number
A character matrix with 14 rows and 8 columns. Contains information on chromosome (CHROM), genome position (POS), reference genome allele (REF), and alternative allele (ALT). Information column (INFO) contains a field called "ANN" which provides the snpeff annotation including predicted functional impact of the variant on the protein function.
A character matrix with 14 rows and 49 columns. Presence/absence for each variant defined in fix. Colnames are sample IDs.
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