getAdjacency: Get Object as Adjacency Matrix
In propr: Calculating Proportionality Between Vectors of Compositional Data

This function uses getNetwork to return a propr or propd object as an adjacency matrix. The diagonal is set to 0.

1	getAdjacency(object, cutoff = NA, include = NA, or = TRUE)

`object`	A `propr` or `propd` object.
`cutoff`	This argument indicates the value at which to cutoff the results. For "rho" and "cor", the function returns pairs with a value greater than the cutoff. For "theta", "phi", and "phs", the function returns pairs with a value less than the cutoff. Leave the argument as `NA` to return all results.
`include`	This argument indicates which features by name should belong to a pair for that pair to get included in the results. Subset performed by `Partner %in% subset \| Pair %in% subset`.
`or`	A boolean. If `FALSE`, `include` subsets by `Partner %in% subset & Pair %in% subset`.