lr2cor: Correlate CLR Data with a Continuous Measurement
In propr: Calculating Proportionality Between Vectors of Compositional Data
Description
Usage
Arguments
Value
View source: R/7-aldex2propr.R
Description
This function correlates each log-ratio transformed
feature vector with a continuous numeric variable.
Usage
1
lr2cor(lr, conditions, ...)
Arguments
lr
A data.frame. A log-ratio transformed counts matrix.
conditions
A numeric vector of a continuous variable.
...
Arguments passed to cor.test.
Value
Returns a data.frame of the estimated
correlation statistic (e.g., r) and p-value
(p) for each log-ratio transformed feature,
with FDR appended as the BH column.
propr documentation built on Dec. 16, 2019, 9:30 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
View source: R/7-aldex2propr.R
Description
This function correlates each log-ratio transformed feature vector with a continuous numeric variable.
Usage
1 | lr2cor(lr, conditions, ...)
|
Arguments
lr |
A data.frame. A log-ratio transformed counts matrix. |
conditions |
A numeric vector of a continuous variable. |
... |
Arguments passed to |
Value
Returns a data.frame of the estimated
correlation statistic (e.g., r) and p-value
(p) for each log-ratio transformed feature,
with FDR appended as the BH column.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.