fa.extension: Apply Dwyer's factor extension to find factor loadings for...

In psych: Procedures for Psychological, Psychometric, and Personality Research

Apply Dwyer's factor extension to find factor loadings for extended variables

Description

Dwyer (1937) introduced a method for finding factor loadings for variables not included in the original analysis. This is basically finding the unattenuated correlation of the extension variables with the factor scores. An alternative, which does not correct for factor reliability was proposed by Gorsuch (1997). Both options are an application of exploratory factor analysis with extensions to new variables. Also useful for finding the validities of variables in the factor space.

Usage

fa.extension(Roe,fo,correct=TRUE)
fa.extend(r,nfactors=1,ov=NULL,ev=NULL,n.obs = NA, np.obs=NULL,
  correct=TRUE,rotate="oblimin",SMC=TRUE,   warnings=TRUE, fm="minres",
  alpha=.1,omega=FALSE,cor="cor",use="pairwise",cor.correct=.5,weight=NULL,
    missing=FALSE, smooth=TRUE, ...) 
faRegression(r,nfactors=1,ov=NULL,dv=NULL, n.obs = NA
 , np.obs=NULL,correct=TRUE,rotate="oblimin",SMC=TRUE,warnings=TRUE, fm="minres",alpha=.1,
 omega=FALSE,cor="cor",use="pairwise",cor.correct=.5,weight=NULL,smooth=TRUE, ...)
#this is just an alias for 
faReg(r,nfactors=1,ov=NULL,dv=NULL, n.obs = NA
 , np.obs=NULL,correct=TRUE,rotate="oblimin",SMC=TRUE,warnings=TRUE, fm="minres",alpha=.1,
 omega=FALSE,cor="cor",use="pairwise",cor.correct=.5,weight=NULL,smooth=TRUE, ...)

Arguments

Roe	The correlations of the original variables with the extended variables
fo	The output from the fa or omega functions applied to the original variables.
correct	correct=TRUE produces Dwyer's solution, correct=FALSE does not correct for factor reliability. This is not quite the Gorsuch technique.
r	A correlation or data matrix with all of the variables to be analyzed by fa.extend
ov	The original variables to factor
ev	The extension variables
dv	The dependent variables if doing faRegression
nfactors	Number of factors to extract, default is 1
n.obs	Number of observations used to find the correlation matrix if using a correlation matrix. Used for finding the goodness of fit statistics. Must be specified if using a correlaton matrix and finding confidence intervals.
np.obs	Pairwise number of observations. Required if using fm="minchi", suggested in other cases to estimate the empirical goodness of fit.
rotate	"none", "varimax", "quartimax", "bentlerT", "geominT" and "bifactor" are orthogonal rotations. "promax", "oblimin", "simplimax", "bentlerQ, "geominQ" and "biquartimin" and "cluster" are possible rotations or transformations of the solution. The default is to do a oblimin transformation, although versions prior to 2009 defaulted to varimax.
SMC	Use squared multiple correlations (SMC=TRUE) or use 1 as initial communality estimate. Try using 1 if imaginary eigen values are reported. If SMC is a vector of length the number of variables, then these values are used as starting values in the case of fm='pa'.
warnings	warnings=TRUE => warn if number of factors is too many
fm	factoring method fm="minres" will do a minimum residual (OLS), fm="wls" will do a weighted least squares (WLS) solution, fm="gls" does a generalized weighted least squares (GLS), fm="pa" will do the principal factor solution, fm="ml" will do a maximum likelihood factor analysis. fm="minchi" will minimize the sample size weighted chi square when treating pairwise correlations with different number of subjects per pair.
alpha	alpha level for the confidence intervals for RMSEA
omega	Do the extension analysis for an omega type analysis
cor	Pass the kind of correlation to fa (defaults to Pearson, can use mixed)
use	Option for the cor function on how to handle missing data.
cor.correct	The correction to be passed to mixed, tet, or polycor (defaults to .5)
weight	Should we weight the variables? (see fa)
missing	When finding factor scores, are missing data allowed?
smooth	Should we smooth the correlation matrix – smoothing produces bad output if there are NAs in the R matrix
...	Additional parameters, specifically, keys may be passed if using the target rotation, or delta if using geominQ, or whether to normalize if using Varimax

Details

It is sometimes the case that factors are derived from a set of variables (the Fo factor loadings) and we want to see what the loadings of an extended set of variables (Fe) would be. Given the original correlation matrix Ro and the correlation of these original variables with the extension variables of Roe, it is a straight forward calculation to find the loadings Fe of the extended variables on the original factors. This technique was developed by Dwyer (1937) for the case of adding new variables to a factor analysis without doing all the work over again. But, as discussed by Horn (1973) factor extension is also appropriate when one does not want to include the extension variables in the original factor analysis, but does want to see what the loadings would be anyway.

This could be done by estimating the factor scores and then finding the covariances of the extension variables with the factor scores. If raw data are available, this is done by faReg. But if the original data are not available, but just the covariance or correlation matrix is, then the use of fa.extension is most appropriate to estimate those correlations before doing the regression.

The factor analysis results from either fa or omega functions applied to the original correlation matrix is extended to the extended variables given the correlations (Roe) of the extended variables with the original variables.

fa.extension assumes that the original factor solution was found by the fa function.

For a very nice discussion of the relationship between factor scores, correlation matrices, and the factor loadings in a factor extension, see Horn (1973).

The fa.extend function may be thought of as a "seeded" factor analysis. That is, the variables in the original set are factored, this solution is then extended to the extension set, and the resulting output is presented as if both the original and extended variables were factored together. This may also be done for an omega analysis.

The example of fa.extend compares the extended solution to a direct solution of all of the variables using factor.congruence.

Another important use of factor extension is when parts of a correlation matrix are missing. Thus suppose you have a correlation matrix formed of variables 1 .. i, j..n where the first i variables correlate with each other (R11) and with the j... n (R12) variables, but the elements of of the R22 (j..n) are missing. That is, X has a missing data structure but we can find the correlation matrix R[1..n,1..n] =cor(X,na.rm=TRUE)

R[1..n,1..n] =

R[1..i,1..i]	R[1..i,j..n]
R[j..n,1..i]	NA

Factors can be found for the R11 matrix and then extended to the variables in the entire matrix. This allows for irt approaches to be applied even with significantly missing data.

f <- fa.extend(R,nf=1, ov=1:i,ev=j:n)

Then the loadings of n loadings of f may be found.

Combining this procedure with fa2irt allows us to find the irt based parameters of the n variables, even though we have substantially incomplete data.

Using the idea behind factor extension it is straightforward to apply these techniques to multiple regression, because the extended loadings are functionally beta weights. . faRegression just organizes the extension analysis in terms of a regression analysis. If the raw data are available, it first finds the factor scores and then correlates these with the dependent variable in the standard regression approach. But, if just the correlation matrix is available, it estimates the factor by dependent variable correlations by the use of link{fa.extend} before doing the regression.

Value

Factor Loadings of the exended variables on the original factors

Author(s)

William Revelle

References

Paul S. Dwyer (1937) The determination of the factor loadings of a given test from the known factor loadings of other tests. Psychometrika, 3, 173-178

Gorsuch, Richard L. (1997) New procedure for extension analysis in exploratory factor analysis, Educational and Psychological Measurement, 57, 725-740

Horn, John L. (1973) On extension analysis and its relation to correlations between variables and factor scores. Multivariate Behavioral Research, 8, (4), 477-489.

See Also

See Also as fa, principal, Dwyer

Examples

 #The Dwyer Example
Ro <- Dwyer[1:7,1:7]
Roe <- Dwyer[1:7,8]
fo <- fa(Ro,2,rotate="none")
fe <- fa.extension(Roe,fo)

#an example from simulated data
set.seed(42) 
 d <- sim.item(12)    #two orthogonal factors 
 R <- cor(d)
 Ro <- R[c(1,2,4,5,7,8,10,11),c(1,2,4,5,7,8,10,11)]
 Roe <- R[c(1,2,4,5,7,8,10,11),c(3,6,9,12)]
 fo <- fa(Ro,2)
 fe <- fa.extension(Roe,fo)
 fa.diagram(fo,fe=fe)
 
 #alternatively just specify the original variables and the extension variables
 fe = fa.extend(R, 2, ov =c(1,2,4,5,7,8,10,11), ev=c(3,6,9,12))
 fa.diagram(fe$fo, fe = fe$fe)
 
 #create two correlated factors
 fx <- matrix(c(.9,.8,.7,.85,.75,.65,rep(0,12),.9,.8,.7,.85,.75,.65),ncol=2)
 Phi <- matrix(c(1,.6,.6,1),2)
 sim.data <- sim.structure(fx,Phi,n=1000,raw=TRUE)
 R <- cor(sim.data$observed)
 Ro <- R[c(1,2,4,5,7,8,10,11),c(1,2,4,5,7,8,10,11)]
 Roe <- R[c(1,2,4,5,7,8,10,11),c(3,6,9,12)]
 fo <- fa(Ro,2)
 fe <- fa.extension(Roe,fo)
 fa.diagram(fo,fe=fe)
 
 #now show how fa.extend works with the same data set
 #note that we have to make sure that the variables are in the order to do the factor congruence
 fe2 <- fa.extend(sim.data$observed,2,ov=c(1,2,4,5,7,8,10,11),ev=c(3,6,9,12))
 fa.diagram(fe2,main="factor analysis with extension variables")
 fa2 <- fa(sim.data$observed[,c(1,2,4,5,7,8,10,11,3,6,9,12)],2)
 factor.congruence(fe2,fa2)
 summary(fe2)
 
 #an example of extending an omega analysis
 
 
fload <- matrix(c(c(c(.9,.8,.7,.6),rep(0,20)),c(c(.9,.8,.7,.6),rep(0,20)),c(c(.9,.8,.7,.6),
        rep(0,20)),c(c(c(.9,.8,.7,.6),rep(0,20)),c(.9,.8,.7,.6))),ncol=5)
 gload <- matrix(rep(.7,5))
 five.factor <- sim.hierarchical(gload,fload,500,TRUE) #create sample data set
 ss <- c(1,2,3,5,6,7,9,10,11,13,14,15,17,18,19)
 Ro <- cor(five.factor$observed[,ss])
 Re <- cor(five.factor$observed[,ss],five.factor$observed[,-ss])
 om5 <-omega(Ro,5)   #the omega analysis
 om.extend <- fa.extension(Re,om5) #the extension analysis
 om.extend #show it
 #now, include it in an omega diagram
 combined.om <- rbind(om5$schmid$sl[,1:ncol(om.extend$loadings)],om.extend$loadings)
 class(combined.om) <-c("psych","extend")
 omega.diagram(combined.om,main="Extended Omega") 
 
 #show how to use fa.extend to do regression analyses with the raw data
 b5 <- faReg (bfi, nfactors = 5, ov =1:25, dv =26:28)
 extension.diagram(b5)
 R <-cor(bfi,use="pairwise")
 b5.r <- faReg(R, nfactors = 5, ov =1:25, dv =26:28) # not identical to b5
 round(b5$regression$coefficients - b5.r$regression$coefficients,2)

psych documentation built on June 27, 2024, 5:07 p.m.