createGenotypes: This function searches the nearby mutational space of a focal...
In rSHAPE: Simulated Haploid Asexual Population Evolution

This function searches the nearby mutational space of a focal genotype, identifies which genotypes in that space have not yet been identified, and create new database entries for any new genotypes.

createGenotypes(tmp_focalGenotype, tmp_focalFitness, maxHamming,
  tmp_landModel = "HoC", tmp_sepString = getOption("shape_sepString"),
  tmpDirection = getOption("shape_allow_backMutations"),
  tmp_relativeFitness = getOption("shape_const_relativeFitness"),
  tmp_currNeighbours = NULL, tmp_genCon,
  tmp_tableSplit = getOption("shape_db_splitTables"),
  tmp_maxRows = getOption("shape_maxRows"),
  tmp_genomeLength = getOption("shape_genomeLength"),
  tmp_distAsS = getOption("shape_const_distAsS"), ...)

`tmp_focalGenotype`	This is the focal genotype for which we want to create missing mutational neighbours.
`tmp_focalFitness`	This is the fitness value of the tmp_focalGenotype.
`maxHamming`	The maximum number of sites that could be changed by mutation of the tmp_focalGenotype. NOTE: At present I've not made the code work for anything other than a value of 1. So do not update without updating associated code. where appropriate.
`tmp_landModel`	This is the character string that defines the fitness landscape model being simulated in this SHAPE run. At present it can be one of: Additive, Fixed, HoC, NK, RMF
`tmp_sepString`	This is a character string used to collapse vectors of characters.
`tmpDirection`	This is a logical which controls if reversions are allowed (ie: if TRUE sites can revert from mutated to WT)
`tmp_relativeFitness`	This is a logical which controls if fitness values are to be calculated as relative and no absolute values that would otherwise be calculated via calls to the fitness landscape model.
`tmp_currNeighbours`	This is an optinal vector that would define the genotype of all neighbours within the 1 step mutational neighbourhood of the tmp_focalGenotype genotype. If NULL then this vector will be calculated within the function.
`tmp_genCon`	This is the filepath for the database file that contains the fitness landscape information.
`tmp_tableSplit`	This is a logical which controls if the tables which report on all genotypes with X mutations should be forced into a single table or it SHAPE is allowed to split them into multiple tables.
`tmp_maxRows`	The maximum number of rows allowed in a database table before a new table is created. This has no meaning if tmp_tableSplit is FALSE.
`tmp_genomeLength`	The length of the genomes, or number of mutable sites/positions, being simulated.
`tmp_distAsS`	This arugment is passed through to downstream function, but will control if the stochastic portion of fitness effect will be considered as selection coefficients (meaning subtracting 1 from the initially drawn value).
`...`	Additional arguments that may get passed to internal functions.