documentation_rank.2: documentation_rank.2

In rbiom: Read/Write, Analyze, and Visualize 'BIOM' Data

documentation_rank.2

Description

documentation_rank.2

Arguments

rank

What rank(s) of taxa to compute biplot coordinates and statistics for, or NULL to disable. E.g. "Phylum", "Genus", ".otu", etc. An integer vector can also be given, where 1 is the highest rank, 2 is the second highest, -1 is the lowest rank, -2 is the second lowest, and 0 is the OTU "rank". Run biom$ranks to see all options for a given rbiom object. Default: 2.

rbiom documentation built on April 3, 2025, 6:39 p.m.