Files in rbiom
Read/Write, Transform, and Summarize 'BIOM' Data

MD5
README.md
NAMESPACE
DESCRIPTION
src/par_unifrac.cpp
src/par_beta_div.cpp
src/Makevars.win
src/RcppExports.cpp
src/rcpp_rarefy.cpp
src/rcpp_alpha_div.cpp
src/rcpp_treeIO.cpp
R/beta.div.r R/write.tree.r R/write.biom.r R/read.tree.r R/imports.r R/RcppExports.R R/print.r R/read.biom.r R/alpha.div.r R/tips.r R/write.xlsx.r R/accessors.r R/read.fasta.r R/rarefy.r R/rbiom.r R/select.r R/write.fasta.r R/subset.r R/taxa.rollup.r R/subtree.r R/unifrac.r man/sequences.Rd man/alpha.div.Rd man/subtree.Rd man/rbiom.Rd man/counts.Rd man/pipe.Rd man/subset.Rd man/phylogeny.Rd man/taxonomy.Rd man/write.tree.Rd man/write.biom.Rd man/read.tree.Rd man/beta.div.Rd man/ntaxa.Rd man/select.Rd man/taxa.ranks.Rd man/read.biom.Rd man/taxa.rollup.Rd man/rarefy.Rd man/nsamples.Rd man/write.xlsx.Rd man/info.Rd man/unifrac.Rd man/tips.Rd man/metadata.Rd man/sample.names.Rd man/read.fasta.Rd man/taxa.names.Rd man/write.fasta.Rd man/print.Rd tests/testthat.R tests/testthat/test_distance.r tests/testthat/test_tree.r tests/testthat/test_file_io.r tests/testthat/test_calculations.r tests/testthat/test_accessors.r tests/testthat/test_subsetting.r
tests/testthat/outputs/subset_ex2.rds
tests/testthat/outputs/beta.div.rds
tests/testthat/outputs/subset_ex1.rds
tests/testthat/outputs/rarefy.rds
tests/testthat/outputs/taxa.rollup.rds
tests/testthat/outputs/subset_ex3.rds
tests/testthat/outputs/select_ex1.rds
tests/testthat/outputs/select_ex3.rds
tests/testthat/outputs/alpha.div.rds
tests/testthat/outputs/select_ex2.rds
tests/testthat/inputs/newick.tre
tests/testthat/inputs/biom.rds
inst/extdata/newick.tre
inst/extdata/hmp50.bz2
rbiom documentation built on July 2, 2020, 1:47 a.m.