add_rcrd_log: Log files added to the SQL database in the restez path

In restez: Create and Query a Local Copy of 'GenBank' in R

Log files added to the SQL database in the restez path

Description

This function is called whenever sequence files have been successfully added to the nucleotide SQL database. Row entries are added to 'add_lot.tsv' in the user's restez path containing the filename, GB release numbers and the time of successful adding. The log is to help users keep track of when sequences have been added.

Usage

add_rcrd_log(fl)

Arguments

fl	filename, character

See Also

Other private: cat_line(), char(), check_connection(), cleanup(), connected(), connection_get(), db_download_intern(), db_sqlngths_get(), db_sqlngths_log(), dir_size(), dwnld_path_get(), dwnld_rcrd_log(), entrez_fasta_get(), entrez_gb_get(), extract_accession(), extract_by_patterns(), extract_clean_sequence(), extract_definition(), extract_features(), extract_inforecpart(), extract_keywords(), extract_locus(), extract_organism(), extract_seqrecpart(), extract_sequence(), extract_version(), file_download(), filename_log(), flatfile_read(), gb_build(), gb_df_create(), gb_df_generate(), gb_sql_add(), gb_sql_query(), gbrelease_check(), gbrelease_get(), gbrelease_log(), has_data(), identify_downloadable_files(), last_add_get(), last_dwnld_get(), last_entry_get(), latest_genbank_release_notes(), latest_genbank_release(), message_missing(), mock_def(), mock_gb_df_generate(), mock_org(), mock_rec(), mock_seq(), predict_datasizes(), readme_log(), restez_connect(), restez_disconnect(), restez_path_check(), restez_rl(), search_gz(), seshinfo_log(), setup(), slctn_get(), slctn_log(), sql_path_get(), status_class(), stat(), testdatadir_get()

restez documentation built on Oct. 25, 2023, 5:06 p.m.