gb_record_get: Get record from GenBank

In restez: Create and Query a Local Copy of 'GenBank' in R

Get record from GenBank

Description

Return the entire GenBank record for an accession ID. Equivalent to rettype='gb' in rentrez::entrez_fetch().

Usage

gb_record_get(id)

Arguments

id	character, sequence accession ID(s)

Value

named vector of records, if no results found NULL

See Also

ncbi_acc_get()

Other get: gb_definition_get(), gb_fasta_get(), gb_organism_get(), gb_sequence_get(), gb_version_get()

Examples

library(restez)
restez_path_set(filepath = tempdir())
demo_db_create(n = 5)
(rec <- gb_record_get(id = 'demo_1'))
(recs <- gb_record_get(id = c('demo_1', 'demo_2')))


# delete demo after example
db_delete(everything = TRUE)

restez documentation built on Oct. 25, 2023, 5:06 p.m.