gb_organism_get: Get organism from GenBank

In restez: Create and Query a Local Copy of 'GenBank' in R

Get organism from GenBank

Description

Return the organism name for an accession ID.

Usage

gb_organism_get(id)

Arguments

id	character, sequence accession ID(s)

Value

named vector of definitions, if no results found NULL

See Also

ncbi_acc_get()

Other get: gb_definition_get(), gb_fasta_get(), gb_record_get(), gb_sequence_get(), gb_version_get()

Examples

library(restez)
restez_path_set(filepath = tempdir())
demo_db_create(n = 5)
(org <- gb_organism_get(id = 'demo_1'))
(orgs <- gb_organism_get(id = c('demo_1', 'demo_2')))


# delete demo after example
db_delete(everything = TRUE)

restez documentation built on Oct. 25, 2023, 5:06 p.m.