pairwiseOverlapDistance: Calculate pairwise overlap coefficients between each pair of...
In ribiosUtils: Utilities from and Interface to the Bioinfo-C (BIOS) Library
Description
Usage
Arguments
Value
Examples
Description
Calculate pairwise overlap coefficients between each pair of items in a list
Usage
1
2
3
Arguments
list
A list
Value
A symmetric matrix of dimension mxm, where m is the
length of the list
pairwiseOverlapDistance is defined the pairwise overlap distance.
Examples
1
2
3
4
5
6
7
8
myList <- list(first=LETTERS[3:5], second=LETTERS[1:3], third=LETTERS[1:5], fourth=LETTERS[6:10])
pairwiseOverlapCoefficient(myList)
pairwiseOverlapDistance(myList)
poormanPOC <- function(list) {
sapply(list, function(x) sapply(list, function(y) overlapCoefficient(x,y)))
}
stopifnot(identical(pairwiseOverlapCoefficient(myList), poormanPOC(myList)))
ribiosUtils documentation built on March 13, 2020, 2:54 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Calculate pairwise overlap coefficients between each pair of items in a list
Usage
1 2 3 |
Arguments
list |
A list |
Value
A symmetric matrix of dimension mxm, where m is the
length of the list
pairwiseOverlapDistance is defined the pairwise overlap distance.
Examples
1 2 3 4 5 6 7 8 | myList <- list(first=LETTERS[3:5], second=LETTERS[1:3], third=LETTERS[1:5], fourth=LETTERS[6:10])
pairwiseOverlapCoefficient(myList)
pairwiseOverlapDistance(myList)
poormanPOC <- function(list) {
sapply(list, function(x) sapply(list, function(y) overlapCoefficient(x,y)))
}
stopifnot(identical(pairwiseOverlapCoefficient(myList), poormanPOC(myList)))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.