taxa_get_taxonomic_tree: Get taxonomic tree from the NCBI
In rphylotastic: Interface to 'Phylotastic' Web Services
Description
Usage
Arguments
Value
See Also
Examples
Description
Get taxonomic tree from the NCBI
Usage
1
taxa_get_taxonomic_tree(taxa)
Arguments
taxa
The vector of names, already resolved
Value
A phylo object
See Also
https://github.com/phylotastic/phylo_services_docs/tree/master/ServiceDescription or the interface of phyloT http://phylot.biobyte.de/
Examples
1
2
3
4
5
taxa <- c("Setophaga striata", "Setophaga magnolia",
"Setophaga angelae", "Setophaga plumbea",
"Setophaga virens")
phy <- taxa_get_taxonomic_tree(taxa)
plot(phy)
rphylotastic documentation built on March 18, 2018, 1:46 p.m.
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Description Usage Arguments Value See Also Examples
Description
Get taxonomic tree from the NCBI
Usage
1 | taxa_get_taxonomic_tree(taxa)
|
Arguments
taxa |
The vector of names, already resolved |
Value
A phylo object
See Also
https://github.com/phylotastic/phylo_services_docs/tree/master/ServiceDescription or the interface of phyloT http://phylot.biobyte.de/
Examples
1 2 3 4 5 | taxa <- c("Setophaga striata", "Setophaga magnolia",
"Setophaga angelae", "Setophaga plumbea",
"Setophaga virens")
phy <- taxa_get_taxonomic_tree(taxa)
plot(phy)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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