taxon_get_species_with_genome: Get all species that have genome sequence in NCBI from a...
In rphylotastic: Interface to 'Phylotastic' Web Services
Description
Usage
Arguments
Value
See Also
Description
Get all species that have genome sequence in NCBI from a taxon
Usage
1
2
taxon_get_species_with_genome(taxon, filters = c("environmental", "sp\\.",
"cf\\."))
Arguments
taxon
A taxon to get subset of species having genome sequence
filters
A character vector of strings to exclude
Value
A vector of names
See Also
https://github.com/phylotastic/phylo_services_docs/tree/master/ServiceDescription or the rotl package, another interface to Open Tree of Life
rphylotastic documentation built on March 18, 2018, 1:46 p.m.
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Description Usage Arguments Value See Also
Description
Get all species that have genome sequence in NCBI from a taxon
Usage
1 2 | taxon_get_species_with_genome(taxon, filters = c("environmental", "sp\\.",
"cf\\."))
|
Arguments
taxon |
A taxon to get subset of species having genome sequence |
filters |
A character vector of strings to exclude |
Value
A vector of names
See Also
https://github.com/phylotastic/phylo_services_docs/tree/master/ServiceDescription or the rotl package, another interface to Open Tree of Life
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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