API for runjags
Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS

Global functions
.onAttach Source code
.onDetach Source code
.onLoad Source code
add.summary Man page Source code
addmutated Source code
alphabeticalvars Source code
as.bugsarray Source code
as.bugsarray.default Source code
as.bugsarray.list Source code
as.bugsarray.mcarray Source code
as.jags Man page Source code
as.jags.default Man page Source code
as.jags.runjags Man page Source code
as.mcmc.bugsarray Source code
as.mcmc.list.bugsarray Source code
as.mcmc.list.runjags Man page Source code
as.mcmc.runjags Man page Source code
as.runjags Man page Source code
as.runjags.default Man page Source code
as.runjags.jags Man page Source code
ask Man page
autoextend.JAGS Man page
autoextend.jags Man page Source code
autorun.JAGS Man page
autorun.jags Man page Source code
check_data_format Source code
checkadaptrequired Source code
checkdataformat Source code
checkmodfact Source code
checkvalidforjags Source code
checkvalidmonitorname Source code
checkvalidrunjagsobject Source code
cleanup.JAGS Man page
cleanup.jags Man page Source code
coda.names Source code
combine.JAGS Man page
combine.MCMC Man page
combine.jags Man page Source code
combine.mcmc Man page Source code
contrasts.MCMC Man page
contrasts.mcmc Man page Source code
dic.runjags Man page Source code
divide.JAGS Man page
divide.jags Man page Source code
drop.k Man page Source code
drop.k.JAGS Man page
drop.k.jags Man page
dump.format Man page Source code
dump.list.format Man page
dynloadmodule Source code
dynunloadmodule Source code
example_runjags Source code
expandindexnames Source code
extend.JAGS Man page
extend.jags Man page Source code
extract Man page Source code
extract.jags Man page
extract.runjags Man page Source code
failed.JAGS Man page
failed.jags Man page Source code
failedjags Man page
findJAGS Man page
findjags Man page Source code
fitted.runjags Man page Source code
getRvers Source code
getargs Source code
getarraynames Source code
getdefaultmethodoptions Source code
getdefaultsummarypars Source code
getjagsnames Source code
getmonitortype Source code
getrunjagsmethod Source code
getstoptexts Source code
getsummaryargs Source code
getvers Source code
is.runjags Man page Source code
jags5 Source code
list.format Man page Source code
load.runJAGSmodule Man page
load.runjagsmodule Man page Source code
loadandcheckrjags Source code
makerunjagsobject Source code
matchvars Source code
mutate.functions Man page
new_unique Man page Source code
normalise.mcmcfun Source code
old.winbugs.extract.small Source code
oldsortjagsvsbugs Source code
parse.varname Source code
plot.runjags Man page Source code
plot.runjagsplots Man page
plot.runjagsstudy Man page Source code
prec2sd Man page Source code
predict.runjags Man page Source code
prettifytable Source code
print.bugsarray Source code
print.crosscorrstats Man page Source code
print.dicstats Man page Source code
print.failedjags Man page Source code
print.gelman.with.target Man page
print.gelmanwithtarget Man page Source code
print.mcsestats Man page Source code
print.rjagsoutput Man page Source code
print.runjags Man page Source code
print.runjagsbginfo Man page Source code
print.runjagsdata Man page Source code
print.runjagsinits Man page Source code
print.runjagsmodel Man page Source code
print.runjagsoutput Man page Source code
print.runjagsplots Man page Source code
print.runjagsstudy Man page Source code
process.mcarray Source code
read.JAGSfile Man page
read.WinBUGS Man page
read.jagsfile Man page Source code Source code
read.winbugs Man page
residuals.runjags Man page Source code
results.JAGS Man page
results.jags Man page Source code
run.JAGS Man page
run.JAGS.study Man page
run.jags Man page Source code
run.jags.study Man page Source code
runJAGS.getOption Man page
runJAGS.options Man page
runjags Man page
runjags-class Man page
runjags-package Man page
runjags.background Source code
runjags.dic Source code
runjags.getOption Man page Source code
runjags.interruptible Source code
runjags.options Man page Source code
runjags.parallel Source code
runjags.printmethods Man page
runjags.readin Source code
runjags.rjags Source code
runjags.rjparallel Source code
runjags.simple Source code
runjags.snow Source code
runjags.start Source code
runjags.summaries Source code
runjags_background Source code
runjags_interruptible Source code
runjags_parallel Source code
runjags_rjags Source code
runjags_rjparallel Source code
runjags_simple Source code
runjags_snow Source code
runjags_start Source code
runjagsclass Man page
runjagspackage Man page
runjagsplots Source code
runjagsstudy-class Man page
runjagsstudyclass Man page
safe.autocorr.diag Source code
safe.gelman.diag Source code
setup.jags Source code
setup.jagsfile Source code
setup_jags Source code
setup_jagsfile Source code
sortjagsvsbugs Source code
summarise.jags.study Source code
summary.bugsarray Source code
summary.runjags Man page Source code
summary.runjagsstudy Man page Source code
swcat Source code
tailf Source code
template.JAGS Man page
template.jags Man page Source code
template_huiwalter Man page Source code
testJAGS Man page
testjags Man page Source code
timestring Man page Source code
unload.runJAGSmodule Man page
unload.runjagsmodule Man page Source code
userunjagsmodule Source code
versionmatch Source code
weightedaverage Source code
winbugs.extract.big Source code
winbugs.extract.small Source code
write.JAGSfile Man page
write.jagsfile Man page Source code
runjags documentation built on April 15, 2022, 5:05 p.m.