combine.ptables: Function for merging p tables for multiple MCMC chains

In rwty: R We There Yet? Visualizing MCMC Convergence in Phylogenetics

Function for merging p tables for multiple MCMC chains

Description

This function is automatically called by some of the plot functions.

Usage

combine.ptables(chains, burnin)

Arguments

chains	A list of rwty.chain objects.
burnin	The number of trees to eliminate as burnin

Value

ptable A data frame of likelihood values and model parameters for the supplied rwty.chain objects

Examples

## Not run: 
data(fungus)
combine.ptables(fungus, burnin=20)

## End(Not run)

rwty documentation built on April 3, 2025, 9:20 p.m.