Files in rwty

R We There Yet? Visualizing MCMC Convergence in Phylogenetics

MD5

DESCRIPTION

NAMESPACE

inst/CITATION

inst/doc/rwty.html

inst/doc/rwty.Rmd inst/doc/rwty.R

vignettes/topology.density.plot.png

vignettes/param.plot.png

vignettes/sliding.posterior.png

vignettes/ess.plot.png

vignettes/pointsplot.png

vignettes/acsf.sliding.png

vignettes/splitfreqs.cumulative.png

vignettes/topology.plot.png

vignettes/sliding.single.png

vignettes/param.correlations.supplied.png

vignettes/param.correlations.default.png

vignettes/asdsf.plot.png

vignettes/param.trace.plot.png

vignettes/heatmap.png

vignettes/rwty.Rmd

vignettes/cumulative.asdsf.png

vignettes/acsf.cumulative.png

vignettes/cumulative.single.png

vignettes/autocorr.plot.png

vignettes/splitfreq.matrix.png

vignettes/cumulative.posterior.png

vignettes/lnl.plot.png

vignettes/heatmap2.png

vignettes/splitfreqs.sliding.png

vignettes/asdsf.tree.png

vignettes/pointsplot2.png

vignettes/compare.plot.png

vignettes/topology.trace.plot.png

vignettes/param.density.plot.png

R/makeplot.splitfreq.matrix.R R/estimate.autocorr.m.R R/parse.clades.R R/topological.approx.ess.R R/load.trees.R R/analyze.rwty.R R/combine.ptables.R R/topological.autocorr.R R/slide.freq.R R/print.rwty.chain.R R/makeplot.pairs.R R/salamanders.R R/makeplot.splitfreqs.cumulative.R R/makeplot.acsf.sliding.R R/makeplot.asdsf.R R/makeplot.param.R R/topological.pseudo.ess.R R/treespace.R R/tree.dist.matrix.R R/makeplot.pseudo.ess.R R/makeplot.autocorr.R R/cumulative.freq.R R/makeplot.all.params.R R/makeplot.splitfreqs.sliding.R R/makeplot.topology.R R/load.multi.R R/check.chains.R R/clade.freq.R R/makeplot.treespace.R R/fungus.R R/makeplot.acsf.cumulative.R man/topological.approx.ess.Rd man/tree.dist.matrix.Rd man/combine.ptables.Rd man/makeplot.all.params.Rd man/makeplot.topology.Rd man/estimate.autocorr.m.Rd man/analyze.rwty.Rd man/makeplot.acsf.cumulative.Rd man/fungus.Rd man/makeplot.splitfreq.matrix.Rd man/makeplot.param.Rd man/topological.autocorr.Rd man/makeplot.pairs.Rd man/load.trees.Rd man/clade.freq.Rd man/salamanders.Rd man/makeplot.splitfreqs.cumulative.Rd man/makeplot.asdsf.Rd man/makeplot.acsf.sliding.Rd man/makeplot.autocorr.Rd man/print.rwty.chain.Rd man/slide.freq.Rd man/makeplot.splitfreqs.sliding.Rd man/load.multi.Rd man/treespace.Rd man/makeplot.pseudo.ess.Rd man/topological.pseudo.ess.Rd man/cumulative.freq.Rd man/parse.clades.Rd man/check.chains.Rd man/makeplot.treespace.Rd

build/vignette.rds

data/salamanders.RData

data/datalist

data/fungus.RData

rwty documentation built on May 2, 2019, 4 p.m.