check_ontology_translate | make sure ontology names are all translated to ontology ids... |
fill_query | Get a names list of ontology and id by id |
getOntologyId | Get a names list of ontology and id by name |
getOntologyName | Get a names list of ontology and id by id |
getOntoMapping | match ontology terms by direct mapping and mapping... |
getOntoMinimal | match descendant terms to ancestor terms within a dataset |
getOntoMultiMapping | Match descendants to ancestors in multiple ontology id lists |
getSeuratRds | read in seurat object .rds files as a named list of seurat... |
ontoMinimal | get the minimal ontology tree of a dataset by reducing... |
ontoMultiMatch | Core function of scOntoMatch Match the ontology annotation of... |
ontoMultiMinimal | get the minimal ontology tree of a list of seurat objects by... |
ontoTranslate | translate named list of obj_list to named list of cell... |
plotMatchedOntoTree | Plot a ontology tree with matched ontology from ontoMatch |
plotOntoTree | Plot a tree representation of ontology terms |
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