API for scoper
Spectral Clustering-Based Method for Identifying B Cell Clones
| Global functions | |
|---|---|
| .onAttach | Source code |
| ExampleDb | Man page |
| ScoperClones | Man page |
| ScoperClones-class | Man page |
| ScoperClones-method | Man page |
| _PACKAGE | Man page |
| as.data.frame,ScoperClones-method | Man page |
| calculateInterVsIntra | Source code |
| defineClonesScoper | Source code |
| findGapSmooth | Source code |
| hierarchicalClones | Man page Source code |
| hierarchicalClones_helper | Source code |
| identicalClones | Man page Source code |
| identicalClones_helper | Source code |
| infer | Source code |
| krnlMtxGenerator | Source code |
| laplacianMtx | Source code |
| likelihoods | Source code |
| logVerbose | Source code |
| makeAffinity | Source code |
| pairwiseMutMatrix | Source code |
| pairwiseMutMatrixRcpp | Source code |
| pairwiseMutions | Source code |
| passToClustering_lev2 | Source code |
| passToClustering_lev3 | Source code |
| passToClustering_lev4 | Source code |
| plot,ScoperClones,missing-method | Man page |
| plotCloneSummary | Man page Source code |
| prepare_db | Source code |
| print,ScoperClones-method | Man page |
| printVerbose | Source code |
| rangeAtoB | Source code |
| scoper | Man page |
| scoper-package | Man page |
| spectralClones | Man page Source code |
| spectralClones_helper | Source code |
| summary,ScoperClones-method | Man page |
| uniqueSeq | Source code |
