create_mu_vector: Generate mus vector

In secsse: Several Examined and Concealed States-Dependent Speciation and Extinction

Generate mus vector

Description

Generate mus vector

Usage

create_mu_vector(state_names, num_concealed_states, model = "CR", lambda_list)

Arguments

state_names	vector of names of all observed states.
num_concealed_states	number of concealed states, generally equivalent to the number of examined states in the dataset.
model	used model, choice of "ETD" (Examined Traits Diversification), "CTD" (Concealed Traits Diversification) or "CR" (Constant Rate).
lambda_list	previously generated list of lambda matrices, used to infer the rate number to start with.

Value

mu vector

secsse documentation built on Oct. 22, 2023, 1:13 a.m.