Nothing
makeCharacter <- function(DF){
dat = DF$dat
dat2 = DF$dat2
dat3 = DF$dat3
# update dat into character array to make writing more efficient
cdat=array(" ",dim=dim(dat))
ndat=rep(" ",dim(dat)[2])
for(j in 1:(dim(dat)[2])){
cdat[,j]=as.character(dat[,j])
ndat[j]=names(dat)[j]
}
ndat = gsub(pattern=".", replacement=" ",ndat, fixed=TRUE)
cdat2=array(" ",dim=dim(dat2))
ndat2=rep(" ",dim(dat2)[2])
for(j in 1:(dim(dat2)[2])){
cdat2[,j]=as.character(dat2[,j])
ndat2[j]=names(dat2)[j]
}
ndat2 = gsub(pattern=".", replacement=" ",ndat2, fixed=TRUE)
cdat3=array(" ",dim=dim(dat3))
ndat3=rep(" ",dim(dat3)[2])
for(j in 1:(dim(dat3)[2])){
cdat3[,j]=as.character(dat3[,j])
ndat3[j]=names(dat3)[j]
}
ndat3 = gsub(pattern=".", replacement=" ",ndat3, fixed=TRUE)
imageIn=FALSE
# combined information data frame and image data frame
if(dim(cdat3)[2] > 1){
if(dim(cdat)[1] == 1){
cdat = matrix(c(cdat, cdat3[,2:dim(cdat3)[2]]), nrow=1)
ndat = c(ndat, ndat3[2:length(ndat3)])
}else{
cdat = cbind(cdat, cdat3[,2:dim(cdat3)[2]])
ndat = c(ndat, ndat3[2:length(ndat3)])
}
imageIn = TRUE
}
hypIn = FALSE
# combined information data frame and hyper link data frame
if(dim(cdat2)[2] > 1){
if(dim(cdat)[1] == 1){
cdat = matrix(c(cdat, cdat2[,2:dim(cdat2)[2]]), nrow=1)
ndat = c(ndat, ndat2[2:length(ndat2)])
}else{
cdat = cbind(cdat, cdat2[,2:dim(cdat2)[2]])
ndat = c(ndat, ndat2[2:length(ndat2)])
}
hypIn = TRUE
}
if(dim(cdat3)[2] > 1){
image.st = (dim(dat)[2]) + 1
}else{
image.st = (dim(dat)[2]) + 1
}
if(dim(cdat3)[2] > 1){
links.st = (dim(dat)[2] + dim(dat3)[2])
}else{
links.st = (dim(dat)[2]) + 1
}
# combine sep.chr
sep.chr = DF$sep.chr
xy.type = DF$xy.type
if((xy.type=="points") | (xy.type=="circle")) new.sep = c(NA,NA)
if( (xy.type=="image.midpoints") | (xy.type=="image.boundaries") | (xy.type=="image.box"))new.sep = c(NA,NA)
if( xy.type=="rect")new.sep = c(NA,NA, NA, NA)
if( xy.type=="poly" ) new.sep = rep(NA,DF$nCoords)
for(i in 1:9){
vec = sep.chr[i]
if(class(vec[[1]]) != "logical") new.sep = c(new.sep, vec[[1]])
}
cDF = list()
cDF$cdat = cdat
cDF$ndat = ndat
cDF$orgDatDim = dim(dat)
cDF$orgDat2Dim = dim(dat2)
cDF$orgDat3Dim = dim(dat3)
cDF$links.st = links.st
cDF$image.st = image.st
cDF$imageIn = imageIn
cDF$hyperIn = hypIn
cDF$sep.chr = new.sep
return(cDF)
}
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