sensi_plot.sensiSamp.TraitEvol: Graphical diagnostics for class 'sensiSamp.TraitEvol'

In sensiPhy: Sensitivity Analysis for Comparative Methods

Description

sensi_plot.sensiSamp.TraitEvol Plot results from samp_continuous and samp_discrete

Usage

## S3 method for class 'sensiSamp.TraitEvol'
sensi_plot(x, graphs = "all", ...)

Arguments

x	output from samp_continuous or samp_continuous
graphs	choose which graph should be printed on the output ("all", 1,2,3 or 4)
...	further arguments to methods

Details

For 'x' from samp_continuous or samp_discrete:

Graph 1: Estimated q12 (discrete) or sigsq (discrete) for each simulation across percentages of species removed. Colours represent percentage of change in comparison with the full model (blue = lower than 5, orange = between 5 and 10 and red = higher than 10).The red horizontal line represents the original value from the full model (with all species).

Graph 2: The proportion of estimated q12 (discrete) or sigsq (discrete) in each category across the percentage of species removed.

Graph 3: Estimated q21 for each simulation across the percentage of species removed (only for samp_discrete).

Graph 4: The percentage of significant q21 across the percentage of species removed (only for samp_discrete).

Author(s)

Gustavo Paterno & Gijsbert Werner

See Also

ggplot, samp_continuous samp_discrete

sensiPhy documentation built on April 14, 2020, 7:15 p.m.