API for seqCBS
Copy Number Profiling using Sequencing and CBS
| Global functions | |
|---|---|
| BayesCptCI | Man page Source code |
| CombineCaseControlC | Man page Source code |
| CombineReadsAcrossRuns | Man page Source code |
| JSSim_Meta | Man page |
| JSSim_NormalSim1 | Man page |
| JSSim_NormalSim2 | Man page |
| JSSim_SpikeMat | Man page |
| JSSim_TumorSim1 | Man page |
| JSSim_TumorSim2 | Man page |
| ScanBIC | Man page Source code |
| ScanCBS | Man page Source code |
| ScanCBSPlot | Man page Source code |
| ScanCBSSimPlot | Man page Source code |
| ScanIterateGrid | Man page Source code |
| ScanStatNewComp | Man page Source code |
| ScanStatRefineComp | Man page Source code |
| SegSeqResProcess | Man page Source code |
| getAutoGridSize | Man page Source code |
| getCountsInWindow | Man page Source code |
| hppSimulate | Man page Source code |
| nhppRateEstimate | Man page Source code |
| nhppSimConstWindowAnalysis | Man page Source code |
| nhppSimConstWindowGen | Man page Source code |
| nhppSimulate | Man page Source code |
| nhppSpike | Man page Source code |
| nhppSpikeConstWindow | Man page Source code |
| readInput | Man page Source code |
| readListInputFile | Man page Source code |
| readSeq | Man page Source code |
| readSeqChiang | Man page Source code |
| readSeqELANDPaired | Man page Source code |
| relCNComp | Man page Source code |
| seqCBS | Man page |
| seqCBS-package | Man page |
