as.fasta | Coerce "phy" or "nex" objects to fasta format. |
clipprobe | Finding the sequences that could be clipped given two... |
ConvFas | Convert files to fasta format |
dataframe2fas | Convert dataframe to fasta format |
enzCut | Restriction enzyme cutting pattern |
enzdata | The restriction enzyme datasets. |
file.cat | Copy or concatenate files to one. |
fil.fas | Fasta data example. |
fil.nxs | Internal nexus data. |
fil.phy | Internal phylip format data |
findprobe | Find probes matching sites |
frag.dat | Reports for simulated RFLP cutting pattern |
gnames.fas | Get the names of sequences from fasta objects. |
plotenz | Plotting the simulated RFLP or TRFLP pattern |
raw2Fas | Read and converting raw DNA files to fasta format. |
read.fasta | Read fasta file |
read.nxs | Read nexus file |
read.phy | Read phylip file |
rename.fas | Change the sequence names of fasta objects. |
revComp | Reverse complement sequence |
selEnz | Selecting restriction enzyme |
seqRFLP-package | Simulation and visualization of Restriction Fragment Length... |
write.fasta | Write fasta format object to file |
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