enzdata: The restriction enzyme datasets.

In seqRFLP: Simulation and visualization of restriction enzyme cutting pattern from DNA sequences.

Description

The rebase restriction enzyme datasets.

Usage

data(enzdata)

Format

A data frame with 777 restriction enzymes data with first column the names of enzyme, the second column the corresponding cutting pattern.

nam

Names of restriction enzyme.

site

Cutting pattern for each restriction enzyme.

Source

Roberts, R.J., Vincze, T., Posfai, J., Macelis, D. (2010) REBASE–a database for DNA restriction and modification: enzymes, genes and genomes. Nucl. Acids Res. 38: D234-D236. http://rebase.neb.com

References

None.

Examples

data(enzdata)
head(enzdata)

Example output

    nam              site
1  AanI           TTA'TAA
2  AarI CACCTGCnnnn'nnnn_
3  AasI    GACnn_nn'nnGTC
4  AatI           AGG'CCT
5 AatII          G_ACGT'C
6  AbsI        CC'TCGA_GG

seqRFLP documentation built on May 2, 2019, 6:02 a.m.