enzCut: Restriction enzyme cutting pattern
In seqRFLP: Simulation and visualization of restriction enzyme cutting pattern from DNA sequences.

Description Usage Arguments Details Value Author(s) References See Also Examples

Function for calculating Restriction enzyme cutting pattern

1	enzCut(DNAsq, enznames, enzdata = enzdata)

`DNAsq`	The input fasta data.
`enznames`	A character vector of the restriction enzyme's names, from one to multiple names.
`enzdata`	Dataframe with first column for enzyme names, second column for enzyme cutting patterns.

Users could add restriction sites manually according to the enzdata styles.

`enz`	The selected restriction enzyme.
`RFLP.site`	The sites recognized by enzyme.
`RFLP.frag`	The fragments generated by enzyme cutting.
`TRFLP`	The fragments predicted by TRFLP

Qiong Ding dingqiong1@gmail.com

None.

See Also frag.dat

## enzCut() example
data(enzdata)
enznames <- c("EcoRI", "Acc65I")
data(fil.phy)
fas <- ConvFas(fil = fil.phy, type = "phy")
enzCut(DNAsq = fas[2], enznames = "AluI", enzdata = enzdata)