plot_serosurvey: Plots seroprevalence from the given serosurvey

In serofoi: Bayesian Estimation of the Force of Infection from Serological Data

Plots seroprevalence from the given serosurvey

Description

Plots seroprevalence from the given serosurvey

Usage

plot_serosurvey(
  serosurvey,
  size_text = 11,
  bin_serosurvey = FALSE,
  bin_step = 5
)

Arguments

serosurvey	survey_year Year in which the survey took place (only needed to plot time models) age_min Floor value of the average between age_min and age_max age_max The size of the sample n_sample Number of samples for each age group n_seropositive Number of positive samples for each age group
size_text	Size of text for plotting (base_size in ggplot2)
bin_serosurvey	If TRUE, serodata is binned by means of prepare_bin_serosurvey. Otherwise, age groups are kept as originally input.
bin_step	Integer specifying the age groups bin size to be used when bin_serosurvey is set to TRUE.

Value

ggplot object with seroprevalence plot

Examples

# Chikungunya example serosurvey
data(chik2015)
plot_serosurvey(chik2015)

# VEEV example serosurvey
data(veev2012)
plot_serosurvey(veev2012)

serofoi documentation built on April 3, 2025, 11:40 p.m.