set_foi_init: Sets initialization function for sampling

In serofoi: Bayesian Estimation of the Force of Infection from Serological Data

Sets initialization function for sampling

Description

Sets initialization function for sampling

Usage

set_foi_init(foi_init, is_log_foi, foi_index)

Arguments

foi_init	Initialization function for sampling. If null, default is chosen depending on the foi-scale of the model
is_log_foi	Boolean to set logarithmic scale in the FoI
foi_index	Integer vector specifying the age-groups for which Force-of-Infection values will be estimated. It can be specified by means of get_foi_index

Value

Function specifying initialization vector for the Force-of-Infection

Examples

data(chagas2012)
foi_index <- get_foi_index(chagas2012, group_size = 5, model_type = "age")
foi_init <- set_foi_init(
  foi_init = NULL,
  is_log_foi = FALSE,
  foi_index = foi_index
)

serofoi documentation built on April 3, 2025, 11:40 p.m.