simer.Data.MVP2Bfile: simer.Data.MVP2Bfile: To transform MVP data to binary format

In simer: Data Simulation for Life Science and Breeding

simer.Data.MVP2Bfile: To transform MVP data to binary format

Description

transforming MVP data to binary format.

Usage

simer.Data.MVP2Bfile(
  bigmat,
  map,
  pheno = NULL,
  out = "simer",
  threads = 1,
  verbose = TRUE
)

Arguments

bigmat	Genotype in bigmatrix format (0,1,2).
map	the map file.
pheno	the phenotype file.
out	the name of output file.
threads	the number of threads used, if NULL, (logical core number - 1) is automatically used.
verbose	whether to print the reminder.

Details

Build date: Sep 12, 2018 Last update: Jan 29, 2025

Value

NULL Output files: .bed, .bim, .fam

Author(s)

Haohao Zhang and Dong Yin

Examples

library(bigmemory)

# Generate bigmat and map
bigmat <- as.big.matrix(matrix(1:6, 3, 2))
map <- generate.map(pop.marker = 3)

# Data converting
simer.Data.MVP2Bfile(bigmat, map, out=tempfile("outfile"))

simer documentation built on April 3, 2025, 9:24 p.m.