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specmine: Metabolomics and Spectral Data Analysis and Mining
Provides a set of methods for metabolomics data analysis, including data loading in different formats, pre-processing, metabolite identification, univariate and multivariate data analysis, machine learning, feature selection and pathway analysis. Case studies can be found on the website: <http://bio.di.uminho.pt/metabolomicspackage/index.html>. This package suggests 'rcytoscapejs', a package not in mainstream repositories. If you need to install it, use: devtools::install_github('cytoscape/r-cytoscape.js@v0.0.7').
Getting started
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Package details |
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| Author | Christopher Costa <chrisbcl@hotmail.com> [aut], Marcelo Maraschin <mtocsy@gmail.com> [aut], Miguel Rocha <mrocha@di.uminho.pt> [aut, cre], Sara Cardoso <saracardoso501@gmail.com> [aut], Telma Afonso <telma.afonso94@gmail.com> [aut], Bruno Pereira <pereirinha_bp@hotmail.com> [aut], C. Beleites [cph], Jie Hao [cph], |
| Maintainer | Miguel Rocha <mrocha@di.uminho.pt> |
| License | GPL (>= 2) |
| Version | 3.1.6 |
| URL | https://github.com/BioSystemsUM/specmine |
| Package repository | View on CRAN |
| Installation |
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