convert_multiple_spcmnm_to_kegg: Convert specmine metabolite codes to KEGG codes.
In specmine: Metabolomics and Spectral Data Analysis and Mining
Description
Usage
Arguments
Value
Examples
View source: R/PATHWAY_ANALYSIS.R
Description
Converts a vector of specmine metabolite codes into a vector of the corresponding KEGG codes. This is performed by using our internal library used in NMR identification, it will not have all chebi codes.
Usage
1
convert_multiple_spcmnm_to_kegg(spcmnm_codes)
Arguments
spcmnm_codes
Vector with the SPCMNM codes (each chebi must be structured like: SPCMNM<number>)
Value
Named vector with kegg codes and respective names. Vector names are the compound names and the vector elements the kegg codes.
Examples
1
2
keggs=convert_multiple_spcmnm_to_kegg(c("SPCMNM2111", "SPCMNM2142", "SPCMNM069774"))
keggs
specmine documentation built on Sept. 21, 2021, 5:06 p.m.
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Description Usage Arguments Value Examples
View source: R/PATHWAY_ANALYSIS.R
Description
Converts a vector of specmine metabolite codes into a vector of the corresponding KEGG codes. This is performed by using our internal library used in NMR identification, it will not have all chebi codes.
Usage
1 | convert_multiple_spcmnm_to_kegg(spcmnm_codes)
|
Arguments
spcmnm_codes |
Vector with the SPCMNM codes (each chebi must be structured like: SPCMNM<number>) |
Value
Named vector with kegg codes and respective names. Vector names are the compound names and the vector elements the kegg codes.
Examples
1 2 | keggs=convert_multiple_spcmnm_to_kegg(c("SPCMNM2111", "SPCMNM2142", "SPCMNM069774"))
keggs
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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