convert_hmdb_to_kegg: Get kegg codes from hmdb codes:
In specmine: Metabolomics and Spectral Data Analysis and Mining
View source: R/PATHWAY_ANALYSIS.R
convert_hmdb_to_kegg R Documentation
Get kegg codes from hmdb codes:
Description
Get kegg codes from hmdb codes:
Usage
convert_hmdb_to_kegg(hmdb_codes)
Arguments
hmdb_codes
Character vector of HMDB identifiers.
Value
A named character vector with the KEGG compound identifiers
corresponding to the input HMDB codes. The vector values are KEGG compound
codes prefixed with "cpd:", and the element names are the matched
compound names.
Examples
## Not run:
convert_hmdb_to_kegg(c("HMDB0000122"))
## End(Not run)
specmine documentation built on Aug. 5, 2026, 5:06 p.m.
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View source: R/PATHWAY_ANALYSIS.R
| convert_hmdb_to_kegg | R Documentation |
Get kegg codes from hmdb codes:
Description
Get kegg codes from hmdb codes:
Usage
convert_hmdb_to_kegg(hmdb_codes)
Arguments
hmdb_codes |
Character vector of HMDB identifiers. |
Value
A named character vector with the KEGG compound identifiers
corresponding to the input HMDB codes. The vector values are KEGG compound
codes prefixed with "cpd:", and the element names are the matched
compound names.
Examples
## Not run:
convert_hmdb_to_kegg(c("HMDB0000122"))
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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