get_metabolights_study: Download a complete MetaboLights study

In specmine: Metabolomics and Spectral Data Analysis and Mining

Download a complete MetaboLights study

Description

Downloads files and metadata for every assay in a public MetaboLights study.

Usage

get_metabolights_study(studyID, directory, verbose = TRUE)

Arguments

studyID	Character string with the MetaboLights study identifier.
directory	Output directory where study files and metadata will be written.
verbose	Logical indicating whether progress messages should be shown.

Value

Invisibly returns a list with one entry per assay containing downloaded files, metadata, and sample-file mappings.

Examples

## Not run: 
tmpdir <- tempdir()
get_metabolights_study("MTBLS1", directory = tmpdir, verbose = FALSE)

## End(Not run)

specmine documentation built on Aug. 5, 2026, 5:06 p.m.