stepp: Subpopulation Treatment Effect Pattern Plot (STEPP)
Version 3.0-11

A method to explore the treatment-covariate interactions in survival or generalized linear model (GLM) for continuous, binomial and count data arising from two treatment arms of a clinical trial. A permutation distribution approach to inference is implemented, based on permuting the covariate values within each treatment group.

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AuthorWai-ki Yip, with contributions from Ann Lazar, David Zahrieh, Chip Cole, Ann Lazar, Marco Bonetti, Victoria Wang, William Barcella and Richard Gelber
Date of publication2014-10-22 09:03:30
MaintainerWai-ki Yip <wkyip@hsph.harvard.edu>
LicenseGPL (>= 2)
Version3.0-11
URL http://www.r-project.org
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("stepp")

Man pages

analyze.CumInc.stepp: analyze competing risks data using Cumulative Incidence...
analyze.KM.stepp: analyze survival data using Kaplan-Maier method
aspirin: the aspirin data set.
big: the big data set.
estimate: the standard generic function for all estimate methods
generate: the standard generic function for the generate method in...
stepp: analyze survival or competing risks data
stepp.CI: a method to create the stmodelCI object
stepp.COX: a method to create the stmodelCOX object
steppes-class: Class '"steppes"'
stepp.GLM: a method to create the stmodelGLM object
stepp.KM: a method to create the stmodelKM object
stepp_plot: generating the stepp plots
stepp_print: a method to print the estimate, covariance matrices and test...
stepp.subpop: a method to create the stsubpop object and generate the...
stepp_summary: produce a summary of the size and various attributes of each...
stepp.test: a method to generate a complete steppes object with effect...
stepp.win: a method to create the stepp window object
stmodelCI-class: Class '"stmodelCI"'
stmodel-class: Class '"stmodel"'
stmodelCOX-class: Class '"stmodelCOX"'
stmodelGLM-class: Class '"stmodelGLM"'
stmodelKM-class: Class '"stmodelKM"'
stsubpop-class: Class '"stsubpop"'
stwin-class: Class '"stwin"'
test: the standard generic function for all test methods

Functions

Stepp.plot Source code
analyze.CumInc.stepp Man page Source code
analyze.KM.stepp Man page Source code
aspirin Man page
big Man page
cuminc.HR Source code
estimate Man page
estimate,steppes-method Man page
estimate,stmodelCI-method Man page
estimate,stmodelCOX-method Man page
estimate,stmodelGLM-method Man page
estimate,stmodelKM-method Man page
generate Man page
generate,stsubpop-method Man page
kmest Source code
kmest1 Source code
plot,steppes-method Man page
plot.steppes Source code
ppv Source code
ppv2 Source code
print,steppes-method Man page
print,stmodelCI-method Man page
print,stmodelCOX-method Man page
print,stmodelGLM-method Man page
print,stmodelKM-method Man page
print.cov.CI Source code
print.cov.GLM Source code
print.cov.KM Source code
print.estimate.CI Source code
print.estimate.GLM Source code
print.estimate.KM Source code
print.stat.CI Source code
print.stat.GLM Source code
print.stat.KM Source code
ssigma Source code
stepp Man page Source code
stepp.CI Man page Source code
stepp.COX Man page Source code
stepp.GLM Man page Source code
stepp.KM Man page Source code
stepp.subpop Man page Source code
stepp.test Man page Source code
stepp.win Man page Source code
stepp_plot Man page Source code
stepp_print Man page Source code
stepp_summary Man page Source code
steppes-class Man page
stmodel-class Man page
stmodelCI-class Man page
stmodelCOX-class Man page
stmodelGLM-class Man page
stmodelKM-class Man page
stsubpop-class Man page
stwin-class Man page
summary,steppes-method Man page
summary,stsubpop-method Man page
summary,stwin-method Man page
test Man page
test,steppes-method Man page
test,stmodelCI-method Man page
test,stmodelCOX-method Man page
test,stmodelGLM-method Man page
test,stmodelKM-method Man page
tpest Source code
tpest1 Source code

Files

src
src/cincsub.f
src/crstm.f
NAMESPACE
data
data/big.rda
data/aspirin.rda
R
R/stmodel.R
R/stmodelCOX.R
R/stmodelCI.R
R/stwin.R
R/stutil.R
R/stsubpop.R
R/stmodelKM.R
R/stepp.R
R/steppes.R
R/stmodelGLM.R
MD5
DESCRIPTION
man
man/stepp.win.Rd
man/stepp.Rd
man/stepp_summary.Rd
man/stepp_print.Rd
man/big.Rd
man/stepp.subpop.Rd
man/stsubpop-class.Rd
man/stepp.KM.Rd
man/aspirin.Rd
man/analyze.KM.stepp.Rd
man/analyze.CumInc.stepp.Rd
man/stepp.test.Rd
man/test.Rd
man/stepp.GLM.Rd
man/steppes-class.Rd
man/generate.Rd
man/stepp.CI.Rd
man/stmodelCI-class.Rd
man/estimate.Rd
man/stepp.COX.Rd
man/stwin-class.Rd
man/stmodelKM-class.Rd
man/stepp_plot.Rd
man/stmodelCOX-class.Rd
man/stmodelGLM-class.Rd
man/stmodel-class.Rd
stepp documentation built on May 19, 2017, 3:46 p.m.