stepp: Subpopulation Treatment Effect Pattern Plot (STEPP)

A method to explore the treatment-covariate interactions in survival or generalized linear model (GLM) for continuous, binomial and count data arising from two treatment arms of a clinical trial. A permutation distribution approach to inference is implemented, based on permuting the covariate values within each treatment group.

Author
Wai-ki Yip, with contributions from Ann Lazar, David Zahrieh, Chip Cole, Ann Lazar, Marco Bonetti, Victoria Wang, William Barcella and Richard Gelber
Date of publication
2014-10-22 09:03:30
Maintainer
Wai-ki Yip <wkyip@hsph.harvard.edu>
License
GPL (>= 2)
Version
3.0-11
URLs

View on CRAN

Man pages

analyze.CumInc.stepp
analyze competing risks data using Cumulative Incidence...
analyze.KM.stepp
analyze survival data using Kaplan-Maier method
aspirin
the aspirin data set.
big
the big data set.
estimate
the standard generic function for all estimate methods
generate
the standard generic function for the generate method in...
stepp
analyze survival or competing risks data
stepp.CI
a method to create the stmodelCI object
stepp.COX
a method to create the stmodelCOX object
steppes-class
Class '"steppes"'
stepp.GLM
a method to create the stmodelGLM object
stepp.KM
a method to create the stmodelKM object
stepp_plot
generating the stepp plots
stepp_print
a method to print the estimate, covariance matrices and test...
stepp.subpop
a method to create the stsubpop object and generate the...
stepp_summary
produce a summary of the size and various attributes of each...
stepp.test
a method to generate a complete steppes object with effect...
stepp.win
a method to create the stepp window object
stmodelCI-class
Class '"stmodelCI"'
stmodel-class
Class '"stmodel"'
stmodelCOX-class
Class '"stmodelCOX"'
stmodelGLM-class
Class '"stmodelGLM"'
stmodelKM-class
Class '"stmodelKM"'
stsubpop-class
Class '"stsubpop"'
stwin-class
Class '"stwin"'
test
the standard generic function for all test methods

Files in this package

stepp
stepp/src
stepp/src/cincsub.f
stepp/src/crstm.f
stepp/NAMESPACE
stepp/data
stepp/data/big.rda
stepp/data/aspirin.rda
stepp/R
stepp/R/stmodel.R
stepp/R/stmodelCOX.R
stepp/R/stmodelCI.R
stepp/R/stwin.R
stepp/R/stutil.R
stepp/R/stsubpop.R
stepp/R/stmodelKM.R
stepp/R/stepp.R
stepp/R/steppes.R
stepp/R/stmodelGLM.R
stepp/MD5
stepp/DESCRIPTION
stepp/man
stepp/man/stepp.win.Rd
stepp/man/stepp.Rd
stepp/man/stepp_summary.Rd
stepp/man/stepp_print.Rd
stepp/man/big.Rd
stepp/man/stepp.subpop.Rd
stepp/man/stsubpop-class.Rd
stepp/man/stepp.KM.Rd
stepp/man/aspirin.Rd
stepp/man/analyze.KM.stepp.Rd
stepp/man/analyze.CumInc.stepp.Rd
stepp/man/stepp.test.Rd
stepp/man/test.Rd
stepp/man/stepp.GLM.Rd
stepp/man/steppes-class.Rd
stepp/man/generate.Rd
stepp/man/stepp.CI.Rd
stepp/man/stmodelCI-class.Rd
stepp/man/estimate.Rd
stepp/man/stepp.COX.Rd
stepp/man/stwin-class.Rd
stepp/man/stmodelKM-class.Rd
stepp/man/stepp_plot.Rd
stepp/man/stmodelCOX-class.Rd
stepp/man/stmodelGLM-class.Rd
stepp/man/stmodel-class.Rd