API for templateICAr
Estimate Brain Networks and Connectivity with ICA and Empirical Priors

Global functions
Chol_samp_fun Man page Source code
EM_templateICA Man page
EM_templateICA.independent Man page Source code
EM_templateICA.spatial Man page Source code
GSR_Param Man page
INLA_check Man page Source code
IW_var Man page Source code
IW_var_cor Man page Source code
LL2_kappa Man page Source code
LL_SQUAREM Man page Source code
Q2_max_check Man page Source code
TR_param Man page
UT2mat Man page Source code
UpdateThetaSQUAREM_templateICA Man page Source code
UpdateTheta_templateICA Man page
UpdateTheta_templateICA.independent Man page Source code
UpdateTheta_templateICA.spatial Man page Source code
VB_FCtemplateICA Man page Source code
activations Man page Source code
add_str Man page Source code
bdiag_m Man page Source code
bdiag_m2 Man page Source code
check_parallel_packages Man page Source code
check_req_ifti_pkg Man page Source code
compute_LL_std Man page Source code
compute_R_inv Man page Source code
compute_mu_s Man page Source code
dim_reduce Man page Source code
dual_reg2 Man page Source code
estimate.ESS Man page Source code
estimate_nu Man page Source code
estimate_nu_matrix Man page Source code
estimate_template Man page Source code
estimate_template.cifti Man page Source code
estimate_template.gifti Man page Source code
estimate_template.nifti Man page Source code
estimate_template_FC Man page Source code
estimate_template_from_DR Man page Source code
estimate_template_from_DR_two Man page Source code
export_template Man page Source code
format_activation_name Man page Source code
getInvCovAR Man page Source code
get_FORMAT Man page Source code
groupICA.cifti Man page Source code
halflogdetX Man page Source code
hpf_param Man page
lik Man page Source code
loglik_kappa_est Man page Source code
make_Pmat Man page Source code
make_mask Man page Source code
make_mesh Man page Source code
make_mesh_2D Man page Source code
norm_BOLD Man page Source code
orthonorm Man page Source code
plot.tICA.cifti Man page Source code
plot.tICA.matrix Man page Source code
plot.tICA.nifti Man page Source code
plot.tICA_act.cifti Man page Source code
plot.template.cifti Man page Source code
plot.template.gifti Man page Source code
plot.template.matrix Man page Source code
plot.template.nifti Man page Source code
print.summary.tICA.cifti Man page Source code
print.summary.tICA.matrix Man page Source code
print.summary.tICA.nifti Man page Source code
print.summary.tICA_act.cifti Man page Source code
print.summary.tICA_act.matrix Man page Source code
print.summary.tICA_act.nifti Man page Source code
print.summary.template.cifti Man page Source code
print.summary.template.gifti Man page Source code
print.summary.template.matrix Man page Source code
print.summary.template.nifti Man page Source code
print.tICA.cifti Man page Source code
print.tICA.matrix Man page Source code
print.tICA.nifti Man page Source code
print.tICA_act.cifti Man page Source code
print.tICA_act.matrix Man page Source code
print.tICA_act.nifti Man page Source code
print.template.cifti Man page Source code
print.template.gifti Man page Source code
print.template.matrix Man page Source code
print.template.nifti Man page Source code
pw_estimate Man page Source code
removebs_template Man page Source code
resample_template Man page Source code
rm_nuisIC Man page Source code
scale_Param Man page
sqrt_XtX Man page Source code
struct_template Man page Source code
summary.tICA.cifti Man page Source code
summary.tICA.matrix Man page Source code
summary.tICA.nifti Man page Source code
summary.tICA_act.cifti Man page Source code
summary.tICA_act.matrix Man page Source code
summary.tICA_act.nifti Man page Source code
summary.template.cifti Man page Source code
summary.template.gifti Man page Source code
summary.template.matrix Man page Source code
summary.template.nifti Man page Source code
templateICA Man page Source code
update_A Man page Source code
update_A_Chol Man page Source code
update_S Man page Source code
update_tau2 Man page Source code
varTol_Param Man page
var_sq_err Man page Source code
var_sq_err_constrained Man page Source code
templateICAr documentation built on April 3, 2025, 7:41 p.m.