get_ids: Get probe-to-symbol ids for a GEO platform accession.

In tinyarray: Expression Data Analysis and Visualization

Get probe-to-symbol ids for a GEO platform accession.

Description

Prefer the available Bioconductor annotation package when possible, and fall back to 'AnnoProbe::idmap()' when no Bioconductor annotation package source exists. The function prints a short explanation plus the code it used.

Usage

get_ids(gpl, type = NULL, install = FALSE, update = FALSE)

Arguments

gpl	a GEO platform accession
type	optional AnnoProbe 'type' setting. If omitted, the function tries candidate types automatically.
install	whether to install and library the package
update	whether to update the package

Value

a cleaned two-column data.frame with 'probe_id' and 'symbol'

Author(s)

Xiaojie Sun

See Also

find_anno

Examples

## Not run: 
get_ids("GPL570")

## End(Not run)

tinyarray documentation built on Aug. 2, 2026, 9:07 a.m.