Files in treestats

Phylogenetic Tree Statistics

NEWS.md README.md R/RcppExports.R R/max_depth.R R/b2.R R/max_closeness.R R/sym_nodes.R R/eigen_centrality.R R/blum.R R/double_cherries.R R/wiener.R R/avgLadder.R R/four_prong.R R/mean_branch_length.R R/make_unbalanced_tree.R R/phylogenetic_diversity.R R/rpanda.R R/j_one_stat.R R/avg_vertex_depth.R R/psv.R R/Ibased.R R/branching_times.R R/pigot_rho.R R/list_statistics.R R/calc_brts_stats.R R/b1.R R/max_del_width.R R/calc_all_stats.R R/var_pair_dist.R R/gamma.R R/tot_coph.R R/cherries.R R/treeness.R R/crown_age.R R/util.R R/number_of_lineages.R R/minmax_laplace.R R/stairs.R R/rquartet.R R/rogers.R R/J_stat.R R/max_ladder.R R/colless.R R/root_imbalance.R R/max_betweenness.R R/mntd.R R/diameter.R R/sackin.R R/max_width.R R/beta.R R/minmax_adj.R R/tot_internal_path.R R/mw_over_md.R R/tot_path.R R/area_per_pair.R R/imbal_steps.R R/nLTT.R R/var_leaf_depth.R R/rebase_ltable.R R/ILnumber.R R/mean_pair_dist.R R/create_bal_unbal_tree.R R/pitchforks.R R/L2phylo.R R/calc_topology_stats.R R/average_leaf_depth.R inst/doc/Example_data.R inst/doc/Example_abc.R inst/doc/Speed_improvement.Rmd inst/doc/Example_abc.Rmd inst/doc/Example_data.Rmd inst/doc/Getting_started.R inst/doc/Getting_started.Rmd inst/doc/Speed_improvement.R tests/testthat.R tests/testthat/test-sym_nodes.R tests/testthat/test-treeness.R tests/testthat/test-four_prong.R tests/testthat/test-eigen_centrality.R tests/testthat/test-double_cherries.R tests/testthat/test-psv.R tests/testthat/test-var-mpd.R tests/testthat/test-rpanda.R tests/testthat/test-branching_times.R tests/testthat/test-sackin.R tests/testthat/test-max_del_width.R tests/testthat/test-area-per-pair.R tests/testthat/test-wiener.R tests/testthat/test-tot_path.R tests/testthat/test-max_depth.R tests/testthat/test-beta.R tests/testthat/test-allstats.R tests/testthat/test-mean_branch_length.R tests/testthat/test-brts_stats.R tests/testthat/test-tot_coph.R tests/testthat/test-pitchforks.R tests/testthat/test-max_closeness.R tests/testthat/test-j.R tests/testthat/test-topology_stats.R tests/testthat/test-var_leaf_depth.R tests/testthat/test-average_leaf_depth.R tests/testthat/test-max_betweenness.R tests/testthat/test-pigot_rho.R tests/testthat/test-brlen.R tests/testthat/test-avgLadder.R tests/testthat/test-create_bal_unbal_tree.R tests/testthat/test-phylo2l.R tests/testthat/test-b1.R tests/testthat/test-colless.R tests/testthat/test-ew_colless.R tests/testthat/test-make_unbalanced_tree.R tests/testthat/test-b2.R tests/testthat/test-nltt.R tests/testthat/test-gamma.R tests/testthat/test-style.R tests/testthat/test-max_ladder.R tests/testthat/test-root_imbalance.R tests/testthat/test-l2phylo.R tests/testthat/test-util.R tests/testthat/test-j_one.R tests/testthat/test-stairs.R tests/testthat/test-minmax_adj.R tests/testthat/test-mpd.R tests/testthat/test-mntd.R tests/testthat/test-rquartet.R tests/testthat/test-blum.R tests/testthat/test-crown_age.R tests/testthat/test-diameter.R tests/testthat/test-polytomies.R tests/testthat/test-rogers.R tests/testthat/test_number_of_lineages.R tests/testthat/test-minmax_laplace.R tests/testthat/test-imbal_steps.R tests/testthat/test-tot_internal_path.R tests/testthat/test-avg_vertex_depth.R tests/testthat/test-colless_quad.R tests/testthat/test-rebase_ltable.R tests/testthat/test-phylodiv.R tests/testthat/test-list_statistics.R tests/testthat/test-mean_i.R tests/testthat/test-cherries.R tests/testthat/test-ILnumber.R tests/testthat/test-colless_corr.R tests/testthat/test-mw_over_md.R tests/testthat/test-max_width.R vignettes/Speed_improvement.Rmd vignettes/Example_abc.Rmd vignettes/Example_data.Rmd vignettes/Getting_started.Rmd man/nLTT.Rd man/mw_over_md.Rd man/mean_branch_length_ext.Rd man/blum.Rd man/var_branch_length_int.Rd man/var_branch_length.Rd man/colless_corr.Rd man/max_closeness.Rd man/average_leaf_depth.Rd man/mean_i.Rd man/phylo_to_l.Rd man/eigen_centrality.Rd man/ew_colless.Rd man/root_imbalance.Rd man/calc_brts_stats.Rd man/max_depth.Rd man/b1.Rd man/pigot_rho.Rd man/laplacian_spectrum.Rd man/max_betweenness.Rd man/area_per_pair.Rd man/tot_internal_path.Rd man/mean_branch_length_int.Rd man/tree_height.Rd man/calc_topology_stats.Rd man/entropy_j.Rd man/list_statistics.Rd man/treeness.Rd man/number_of_lineages.Rd man/wiener.Rd man/stairs2.Rd man/minmax_adj.Rd man/stairs.Rd man/phylogenetic_diversity.Rd man/var_leaf_depth.Rd man/max_width.Rd man/rebase_ltable.Rd man/make_unbalanced_tree.Rd man/max_del_width.Rd man/beta_statistic.Rd man/var_branch_length_ext.Rd man/avg_ladder.Rd man/mean_branch_length.Rd man/nLTT_base.Rd man/mntd.Rd man/calc_all_stats.Rd man/max_ladder.Rd man/pitchforks.Rd man/rogers.Rd man/tot_path_length.Rd man/colless.Rd man/ILnumber.Rd man/var_pair_dist.Rd man/gamma_statistic.Rd man/mean_pair_dist.Rd man/sackin.Rd man/cherries.Rd man/imbalance_steps.Rd man/four_prong.Rd man/psv.Rd man/crown_age.Rd man/rquartet.Rd man/colless_quad.Rd man/double_cherries.Rd man/create_fully_balanced_tree.Rd man/branching_times.Rd man/j_one.Rd man/avg_vert_depth.Rd man/treestats-package.Rd man/l_to_phylo.Rd man/b2.Rd man/diameter.Rd man/tot_coph.Rd man/minmax_laplace.Rd man/sym_nodes.Rd man/create_fully_unbalanced_tree.Rd man/ltable_to_newick.Rd