Description Usage Arguments Value Examples
Generate VCF file from UMI sample or UMI experiment object
1 | generateVCF(object, outDir = getwd(), outFile, printAll = FALSE)
|
object |
Requires a UMI sample or UMI experiment object |
outDir |
String. Output directory, defaults to working directory. |
outFile |
String. Name of the output file |
printAll |
Logical. Should all or only trusted variant be printed? |
A VCF file
1 2 3 4 5 6 7 8 9 10 11 12 | ## Not run:
library(umiAnalyzer)
main <- system.file("extdata", package = "umiAnalyzer")
simsen <- createUmiExperiment(main)
simsen <- filterUmiObject(simsen)
generateVCF(simsen,'simsen.vcf', printAll = FALSE, save = FALSE)
## End(Not run)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.